ur_rna.RNAstructureUI.windows

Class PredictWindowBase.PredictTaskBase

java.lang.Object

ur_rna.RNAstructureUI.windows.PredictWindowBase.PredictTaskBase

All Implemented Interfaces:

java.lang.Runnable, PredictWindowBase.BackgroundTask

Direct Known Subclasses:

PredictBimolStructureWindow.PredictTask, PredictMultiStructureWindow.PredictTask, PredictSingleStructureWindow.PredictSingleStructureTask, PredictTwoStructureWindow.PredictTask

Enclosing class:

PredictWindowBase

public abstract static class PredictWindowBase.PredictTaskBase
extends java.lang.Object
implements PredictWindowBase.BackgroundTask

Field Summary

Fields

Modifier and Type	Field and Description
protected boolean	canCancel
java.lang.String	errorMessage
boolean	hadError
protected boolean	isCanceled
protected int	nextStepWork
protected java.lang.String	status
protected ProgressHandler	stepProgress
protected int	workDone

Constructor Summary

Constructors

Constructor and Description
PredictTaskBase()

Method Summary

Modifier and Type	Method and Description
void	cancel()
protected boolean	checkError(int... list)
protected boolean	checkError(RNA... rnaList)
protected boolean	checkError(RNAstructureBackendCalculator... list)
protected boolean	checkError(java.lang.String... list)
protected boolean	checkError(TwoRNA... rnaList)
int	getProgress()
java.lang.String	getStatus()
boolean	isCancelable()
protected void	nextStep(java.lang.String stepStatus, boolean stepCancel, int stepWork)
boolean	onComplete() Show the results window.
void	run()
protected abstract void	runCalc()
protected void	setError(java.lang.String message)
protected abstract boolean	showResults()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

canCancel

protected boolean canCancel

errorMessage

public java.lang.String errorMessage

hadError

public boolean hadError

isCanceled

protected boolean isCanceled

nextStepWork

protected int nextStepWork

status

protected java.lang.String status

stepProgress

protected ProgressHandler stepProgress

workDone

protected int workDone

Constructor Detail

PredictTaskBase

public PredictTaskBase()

Method Detail

cancel

public void cancel()

Specified by:

cancel in interface PredictWindowBase.BackgroundTask

checkError

protected boolean checkError(int... list)

checkError

protected boolean checkError(RNA... rnaList)

checkError

protected boolean checkError(RNAstructureBackendCalculator... list)

checkError

protected boolean checkError(java.lang.String... list)

checkError

protected boolean checkError(TwoRNA... rnaList)

getProgress

public int getProgress()

Specified by:

getProgress in interface PredictWindowBase.BackgroundTask

getStatus

public java.lang.String getStatus()

Specified by:

getStatus in interface PredictWindowBase.BackgroundTask

isCancelable

public boolean isCancelable()

Specified by:

isCancelable in interface PredictWindowBase.BackgroundTask

nextStep

protected void nextStep(java.lang.String stepStatus,
                        boolean stepCancel,
                        int stepWork)

onComplete

public boolean onComplete()

Show the results window.

Returns:

True if the results window could be shown. False otherwise.

run

public void run()

Specified by:

run in interface java.lang.Runnable

Specified by:

run in interface PredictWindowBase.BackgroundTask

runCalc

protected abstract void runCalc()

setError

protected void setError(java.lang.String message)

showResults

protected abstract boolean showResults()