RNAstructure logo

RNAstructure Installation and Overview
Index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z


A

N

B

Building Requirements
Building Requirements: Compilers
Building Requirements: Compiler Flags

Building Requirements: CUDA
Building Requirements: DATAPATH Variable
Building Requirements: RNAstructure GUI Essential Software
Building Requirements: RNAstructure GUI Essential Variables
Building Requirements: Windows Interfaces
Building the Command Line (Text) Interfaces

Building the Command Line (Text) Interfaces for CUDA
Building the GUI Interfaces
Building the RNAstructure Repository
Building SMP Parallel Programs

O

Object File Notes

C

Components of the RNAstructure Repository

P

D

Q

E

R

Repository Organization
Running the JAVA GUI

F

S

G

T

H

U

Update History

I

Installation Instructions: Linux 32 and 64-bit Installation Instructions: Macintosh Installation Instructions: Windows Interface Summary: AllSub
Interface Summary: bifold
Interface Summary: bipartition
Interface Summary: CircleCompare
Interface Summary: ct2dot
Interface Summary: dot2ct
Interface Summary: draw
Interface Summary: DuplexFold
Interface Summary: dynalign
Interface Summary: dynalign-smp
Interface Summary: DynalignDotPlot
Interface Summary: efn2
Interface Summary: EnergyPlot
Interface Summary: EnsembleEnergy
Interface Summary: Fold
Interface Summary: JAVA Cross Platform GUI
Interface Summary: MaxExpect
Interface Summary: multilign
Interface Summary: multilign-smp
Interface Summary: NAPSS
Interface Summary: oligoscreen
Interface Summary: OligoWalk
Interface Summary: partition
Interface Summary: PARTS
Interface Summary: ProbabilityPlot
Interface Summary: ProbablePair
Interface Summary: ProbKnot
Interface Summary: refold
Interface Summary: RemovePseudoknots
Interface Summary: scorer
Interface Summary: stochastic
Interface Summary: TurboFold
Interface Summary: TurboFold-smp
Interface Summary: Windows Native GUI
Interface Summary: Windows Text Interfaces

V

J

W

K

X

L

Libraries Built by the RNAstructure Repository
Libraries Built by the RNAstructure Repository: Dynalign
Libraries Built by the RNAstructure Repository: Dynalign SMP
Libraries Built by the RNAstructure Repository: Hybrid RNA
Libraries Built by the RNAstructure Repository: Multilign
Libraries Built by the RNAstructure Repository: Multilign SMP
Libraries Built by the RNAstructure Repository: Oligo
Libraries Built by the RNAstructure Repository: PARTS
Libraries Built by the RNAstructure Repository: Postscript
Libraries Built by the RNAstructure Repository: RNA
Libraries Built by the RNAstructure Repository: RNAstructure GUI Libraries Built by the RNAstructure Repository: TurboFold
Libraries Built by the RNAstructure Repository: TurboFold SMP

Y

M

Makefiles
Makefiles: Java Interface
Makefiles: Main Repository
Makefiles: NAPSS
Makefiles: OligoWalk
Makefiles: PARTS
Makefiles: Postscript Library
Makefiles: RNA Class
Makefiles: Testing Framework

Z