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RNAstructure
efn2
Results
(Calculate the folding free energy of structures in a CT file.)
Thermodynamic details for structure # 1 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = -0.2 for closure of 377-996 Stack = -1.4 for stack of 937-993 Stack = 0.3 for stack of 938-992 Stack = -0.5 for stack of 939-991 Stack = -1.3 for stack of 940-990 Stack = -1.4 for stack of 941-989 Stack = -1.4 for stack of 942-988 Stack = -3.4 for stack of 943-987 Stack = -2.1 for stack of 944-986 Stack = -1.3 for stack of 945-985 Helix total = -12.5 Multiloop = 7.6 for closure of 946-984 Stack = -2.4 for stack of 961-970 Helix total = -2.4 Hairpin = 3.1 for closure of 962-969 Stack = -2.1 for stack of 950-959 Helix total = -2.1 Hairpin = 4.1 for closure of 951-958 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 438-919 Stack = -1.1 for stack of 439-918 Stack = -0.9 for stack of 440-917 Stack = -1.3 for stack of 441-916 Stack = -0.9 for stack of 442-915 Helix total = -6.3 Multiloop = 1.9 for closure of 443-914 Stack = -3.3 for stack of 904-912 Helix total = -3.3 Hairpin = 4.6 for closure of 905-911 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -166.9 Thermodynamic details for structure # 2 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Stack = -1.1 for stack of 439-938 Helix total = -12.1 Multiloop = 3.4 for closure of 440-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 461-919 Stack = -1.1 for stack of 462-918 Stack = -0.9 for stack of 463-917 Stack = -1.0 for stack of 464-916 Stack = -1.3 for stack of 465-915 Helix total = -6.4 Multiloop = 4.8 for closure of 466-914 Stack = -2.2 for stack of 898-911 Stack = -2.4 for stack of 899-910 Stack = -2.1 for stack of 900-909 Stack = -0.9 for stack of 901-908 Helix total = -7.6 Hairpin = 5.3 for closure of 902-907 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -171.8 Thermodynamic details for structure # 3 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Helix total = -11.0 Multiloop = 1.5 for closure of 439-938 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -0.9 for stack of 804-915 Stack = -1.1 for stack of 805-914 Stack = -2.1 for stack of 806-913 Stack = -3.3 for stack of 807-912 Helix total = -7.4 Internal/bulge = 0.4 for closure of 808-911 Size = 1 BP stack across bulge = -3.4 Stack = -2.1 for stack of 809-909 Stack = -0.6 for stack of 810-908 Stack = -1.4 for stack of 811-907 Helix total = -4.1 Internal/bulge = -0.2 for closure of 812-906 Size = 1 BP stack across bulge = -2.4 Stack = -3.3 for stack of 814-905 Stack = -2.1 for stack of 815-904 Stack = -0.9 for stack of 816-903 Helix total = -6.3 Multiloop = 3.6 for closure of 817-902 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -2.4 for stack of 867-881 Helix total = -2.4 Hairpin = 4.3 for closure of 868-880 Stack = -2.2 for stack of 854-866 Stack = -2.1 for stack of 855-865 Stack = -2.1 for stack of 856-864 Helix total = -6.4 Hairpin = 5.0 for closure of 857-863 Stack = -2.1 for stack of 819-853 Stack = -2.4 for stack of 820-852 Helix total = -4.5 Internal/bulge = 2.3 for closure of 821-851 Size = 1 BP stack across bulge = -1.1 Stack = -1.0 for stack of 822-849 Stack = -2.1 for stack of 823-848 Stack = -2.4 for stack of 824-847 Stack = -1.4 for stack of 825-846 Stack = -1.5 for stack of 826-845 Helix total = -8.4 Hairpin = 5.6 for closure of 827-844 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -0.9 for stack of 468-605 Stack = -2.1 for stack of 469-604 Helix total = -3.0 Multiloop = 2.1 for closure of 470-603 Stack = -0.6 for stack of 500-601 Stack = -1.0 for stack of 501-600 Stack = -2.5 for stack of 502-599 Stack = -2.1 for stack of 503-598 Stack = -0.6 for stack of 504-597 Stack = -2.5 for stack of 505-596 Helix total = -9.3 Internal/bulge = 3.3 for closure of 506-595 Size = 2 Stack = -2.1 for stack of 509-594 Stack = -3.4 for stack of 510-593 Stack = -2.1 for stack of 511-592 Helix total = -7.6 Internal/bulge = 1.2 for closure of 512-591 Size = 2 Stack = -3.3 for stack of 514-589 Stack = -2.2 for stack of 515-588 Helix total = -5.5 Internal/bulge = 1.9 for closure of 516-587 Size = 2 Stack = -1.3 for stack of 518-585 Helix total = -1.3 Multiloop = 6.0 for closure of 519-584 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -1.0 for stack of 522-544 Helix total = -1.0 Internal/bulge = 1.2 for closure of 523-543 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 525-542 Stack = -0.6 for stack of 526-541 Stack = -1.4 for stack of 527-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -9.5 Hairpin = 4.1 for closure of 531-536 Stack = -3.4 for stack of 487-494 Helix total = -3.4 Hairpin = 4.1 for closure of 488-493 Stack = -2.1 for stack of 472-486 Stack = -0.6 for stack of 473-485 Stack = -2.1 for stack of 474-484 Helix total = -4.8 Hairpin = 4.9 for closure of 475-483 Stack = -1.3 for stack of 440-466 Stack = -1.0 for stack of 441-465 Stack = -0.9 for stack of 442-464 Helix total = -3.2 Internal/bulge = 1.6 for closure of 443-463 Size = 4 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -176.5 Thermodynamic details for structure # 4 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Helix total = -8.9 Multiloop = -1.1 for closure of 438-939 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 883-919 Stack = -1.1 for stack of 884-918 Helix total = -3.2 Internal/bulge = 4.0 for closure of 885-917 Size = 6 Stack = -1.1 for stack of 890-914 Stack = -2.1 for stack of 891-913 Helix total = -3.2 Internal/bulge = 4.0 for closure of 892-912 Size = 5 Stack = -2.2 for stack of 898-911 Stack = -2.4 for stack of 899-910 Stack = -2.1 for stack of 900-909 Stack = -0.9 for stack of 901-908 Helix total = -7.6 Hairpin = 5.3 for closure of 902-907 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -1.3 for stack of 440-466 Stack = -1.0 for stack of 441-465 Stack = -0.9 for stack of 442-464 Helix total = -3.2 Internal/bulge = 1.6 for closure of 443-463 Size = 4 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -173.6 Thermodynamic details for structure # 5 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = -0.2 for closure of 377-996 Stack = -1.4 for stack of 937-993 Stack = 0.3 for stack of 938-992 Stack = -0.5 for stack of 939-991 Stack = -1.3 for stack of 940-990 Stack = -1.4 for stack of 941-989 Stack = -1.4 for stack of 942-988 Stack = -3.4 for stack of 943-987 Stack = -2.1 for stack of 944-986 Stack = -1.3 for stack of 945-985 Helix total = -12.5 Multiloop = 7.6 for closure of 946-984 Stack = -2.4 for stack of 961-970 Helix total = -2.4 Hairpin = 3.1 for closure of 962-969 Stack = -2.1 for stack of 950-959 Helix total = -2.1 Hairpin = 4.1 for closure of 951-958 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 438-919 Stack = -1.1 for stack of 439-918 Stack = -0.9 for stack of 440-917 Stack = -1.3 for stack of 441-916 Stack = -0.9 for stack of 442-915 Helix total = -6.3 Multiloop = 1.9 for closure of 443-914 Stack = -3.3 for stack of 904-912 Helix total = -3.3 Hairpin = 4.6 for closure of 905-911 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Internal/bulge = 5.2 for closure of 498-540 Size = 5 Stack = -0.9 for stack of 500-535 Stack = -1.0 for stack of 501-534 Stack = -2.5 for stack of 502-533 Stack = -2.1 for stack of 503-532 Stack = -2.1 for stack of 504-531 Helix total = -8.6 Internal/bulge = 5.1 for closure of 505-530 Size = 11 Stack = -2.5 for stack of 510-522 Stack = -2.1 for stack of 511-521 Helix total = -4.6 Hairpin = 5.5 for closure of 512-520 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -166.3 Thermodynamic details for structure # 6 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = -0.2 for closure of 377-996 Stack = -1.4 for stack of 937-993 Stack = 0.3 for stack of 938-992 Stack = -0.5 for stack of 939-991 Stack = -1.3 for stack of 940-990 Stack = -1.4 for stack of 941-989 Stack = -1.4 for stack of 942-988 Stack = -3.4 for stack of 943-987 Stack = -2.1 for stack of 944-986 Stack = -1.3 for stack of 945-985 Helix total = -12.5 Multiloop = 7.6 for closure of 946-984 Stack = -2.4 for stack of 961-970 Helix total = -2.4 Hairpin = 3.1 for closure of 962-969 Stack = -2.1 for stack of 950-959 Helix total = -2.1 Hairpin = 4.1 for closure of 951-958 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 438-919 Stack = -1.1 for stack of 439-918 Stack = -0.9 for stack of 440-917 Stack = -1.3 for stack of 441-916 Stack = -0.9 for stack of 442-915 Helix total = -6.3 Multiloop = 1.9 for closure of 443-914 Stack = -3.3 for stack of 904-912 Helix total = -3.3 Hairpin = 4.6 for closure of 905-911 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 8.0 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -0.9 for stack of 661-705 Stack = -1.1 for stack of 662-704 Stack = -1.0 for stack of 663-703 Stack = -1.3 for stack of 664-702 Stack = -1.4 for stack of 665-701 Stack = -0.6 for stack of 666-700 Helix total = -6.3 Internal/bulge = 4.5 for closure of 667-699 Size = 5 Stack = -2.1 for stack of 669-694 Stack = -1.4 for stack of 670-693 Stack = -1.5 for stack of 671-692 Helix total = -5.0 Hairpin = 5.6 for closure of 672-691 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -165.3 Thermodynamic details for structure # 7 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Helix total = -11.0 Multiloop = 1.5 for closure of 439-938 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -0.9 for stack of 804-915 Stack = -1.1 for stack of 805-914 Stack = -2.1 for stack of 806-913 Stack = -3.3 for stack of 807-912 Helix total = -7.4 Internal/bulge = 0.4 for closure of 808-911 Size = 1 BP stack across bulge = -3.4 Stack = -2.1 for stack of 809-909 Stack = -0.6 for stack of 810-908 Stack = -1.4 for stack of 811-907 Helix total = -4.1 Internal/bulge = -0.2 for closure of 812-906 Size = 1 BP stack across bulge = -2.4 Stack = -3.3 for stack of 814-905 Stack = -2.1 for stack of 815-904 Stack = -0.9 for stack of 816-903 Helix total = -6.3 Multiloop = 3.7 for closure of 817-902 Stack = -1.4 for stack of 868-892 Stack = -1.4 for stack of 869-891 Stack = -1.3 for stack of 870-890 Helix total = -4.1 Hairpin = 6.9 for closure of 871-889 Stack = -2.2 for stack of 854-866 Stack = -2.1 for stack of 855-865 Stack = -2.1 for stack of 856-864 Helix total = -6.4 Hairpin = 5.0 for closure of 857-863 Stack = -2.1 for stack of 819-853 Stack = -2.4 for stack of 820-852 Helix total = -4.5 Internal/bulge = 2.3 for closure of 821-851 Size = 1 BP stack across bulge = -1.1 Stack = -1.0 for stack of 822-849 Stack = -2.1 for stack of 823-848 Stack = -2.4 for stack of 824-847 Stack = -1.4 for stack of 825-846 Stack = -1.5 for stack of 826-845 Helix total = -8.4 Hairpin = 5.6 for closure of 827-844 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -0.9 for stack of 468-605 Stack = -2.1 for stack of 469-604 Helix total = -3.0 Multiloop = 2.1 for closure of 470-603 Stack = -0.6 for stack of 500-601 Stack = -1.0 for stack of 501-600 Stack = -2.5 for stack of 502-599 Stack = -2.1 for stack of 503-598 Stack = -0.6 for stack of 504-597 Stack = -2.5 for stack of 505-596 Helix total = -9.3 Internal/bulge = 3.3 for closure of 506-595 Size = 2 Stack = -2.1 for stack of 509-594 Stack = -3.4 for stack of 510-593 Stack = -2.1 for stack of 511-592 Helix total = -7.6 Internal/bulge = 1.2 for closure of 512-591 Size = 2 Stack = -3.3 for stack of 514-589 Stack = -2.2 for stack of 515-588 Helix total = -5.5 Internal/bulge = 1.9 for closure of 516-587 Size = 2 Stack = -1.3 for stack of 518-585 Helix total = -1.3 Multiloop = 6.0 for closure of 519-584 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -1.0 for stack of 522-544 Helix total = -1.0 Internal/bulge = 1.2 for closure of 523-543 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 525-542 Stack = -0.6 for stack of 526-541 Stack = -1.4 for stack of 527-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -9.5 Hairpin = 4.1 for closure of 531-536 Stack = -3.4 for stack of 487-494 Helix total = -3.4 Hairpin = 4.1 for closure of 488-493 Stack = -2.1 for stack of 472-486 Stack = -0.6 for stack of 473-485 Stack = -2.1 for stack of 474-484 Helix total = -4.8 Hairpin = 4.9 for closure of 475-483 Stack = -1.3 for stack of 440-466 Stack = -1.0 for stack of 441-465 Stack = -0.9 for stack of 442-464 Helix total = -3.2 Internal/bulge = 1.6 for closure of 443-463 Size = 4 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -177.6 Thermodynamic details for structure # 8 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Stack = -1.1 for stack of 439-938 Helix total = -12.1 Multiloop = 3.4 for closure of 440-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 461-919 Stack = -1.1 for stack of 462-918 Stack = -0.9 for stack of 463-917 Stack = -1.0 for stack of 464-916 Stack = -1.3 for stack of 465-915 Helix total = -6.4 Internal/bulge = 4.1 for closure of 466-914 Size = 4 Stack = -2.1 for stack of 467-909 Stack = -0.9 for stack of 468-908 Helix total = -3.0 Multiloop = 4.9 for closure of 469-907 Stack = -3.3 for stack of 887-905 Stack = -2.1 for stack of 888-904 Helix total = -5.4 Internal/bulge = 1.9 for closure of 889-903 Size = 2 Stack = -2.1 for stack of 891-901 Stack = -2.4 for stack of 892-900 Helix total = -4.5 Hairpin = 4.6 for closure of 893-899 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -173.8 Thermodynamic details for structure # 9 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = -0.2 for closure of 377-996 Stack = -1.4 for stack of 937-993 Stack = 0.3 for stack of 938-992 Stack = -0.5 for stack of 939-991 Stack = -1.3 for stack of 940-990 Stack = -1.4 for stack of 941-989 Stack = -1.4 for stack of 942-988 Stack = -3.4 for stack of 943-987 Stack = -2.1 for stack of 944-986 Stack = -1.3 for stack of 945-985 Helix total = -12.5 Internal/bulge = 5.6 for closure of 946-984 Size = 7 Stack = -2.1 for stack of 954-983 Helix total = -2.1 Internal/bulge = 0.3 for closure of 955-982 Size = 2 Stack = -3.4 for stack of 957-980 Stack = -2.1 for stack of 958-979 Stack = -1.0 for stack of 959-978 Helix total = -6.5 Internal/bulge = 5.4 for closure of 960-977 Size = 6 Stack = -2.4 for stack of 961-970 Helix total = -2.4 Hairpin = 3.1 for closure of 962-969 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 438-919 Stack = -1.1 for stack of 439-918 Stack = -0.9 for stack of 440-917 Stack = -1.3 for stack of 441-916 Stack = -0.9 for stack of 442-915 Helix total = -6.3 Multiloop = 1.9 for closure of 443-914 Stack = -3.3 for stack of 904-912 Helix total = -3.3 Hairpin = 4.6 for closure of 905-911 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -173.8 Thermodynamic details for structure # 10 Exterior loop = -1.0 Stack = -1.3 for stack of 949-1000 Stack = -2.1 for stack of 950-999 Stack = -2.4 for stack of 951-998 Helix total = -5.8 Internal/bulge = 5.0 for closure of 952-997 Size = 5 Stack = -0.9 for stack of 953-991 Stack = -0.6 for stack of 954-990 Helix total = -1.5 Internal/bulge = -0.2 for closure of 955-989 Size = 2 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 108-943 Stack = -1.1 for stack of 109-942 Stack = -2.4 for stack of 110-941 Stack = -3.3 for stack of 111-940 Helix total = -8.9 Multiloop = 4.0 for closure of 112-939 Stack = -0.6 for stack of 146-931 Stack = -1.3 for stack of 147-930 Stack = -0.6 for stack of 148-929 Stack = -2.1 for stack of 149-928 Stack = -3.3 for stack of 150-927 Stack = -2.4 for stack of 151-926 Helix total = -10.3 Internal/bulge = 1.3 for closure of 152-925 Size = 1 BP stack across bulge = -2.1 Stack = -1.5 for stack of 154-924 Stack = -1.3 for stack of 155-923 Stack = -2.1 for stack of 156-922 Stack = -2.2 for stack of 157-921 Stack = -1.3 for stack of 158-920 Stack = 0.3 for stack of 159-919 Stack = -1.4 for stack of 160-918 Helix total = -9.5 Internal/bulge = 3.7 for closure of 161-917 Size = 3 Stack = -1.1 for stack of 163-914 Stack = -2.1 for stack of 164-913 Helix total = -3.2 Multiloop = 4.8 for closure of 165-912 Stack = -2.2 for stack of 898-911 Stack = -2.4 for stack of 899-910 Stack = -2.1 for stack of 900-909 Stack = -0.9 for stack of 901-908 Helix total = -7.6 Hairpin = 5.3 for closure of 902-907 Stack = -1.1 for stack of 218-885 Stack = -2.1 for stack of 219-884 Stack = -2.4 for stack of 220-883 Helix total = -5.6 Internal/bulge = 1.5 for closure of 221-882 Size = 4 Stack = -2.1 for stack of 224-879 Stack = -3.3 for stack of 225-878 Helix total = -5.4 Multiloop = 7.9 for closure of 226-877 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -0.6 for stack of 227-474 Stack = -2.1 for stack of 228-473 Stack = -3.4 for stack of 229-472 Stack = -2.1 for stack of 230-471 Stack = -0.6 for stack of 231-470 Stack = -0.9 for stack of 232-469 Helix total = -9.7 Multiloop = 5.4 for closure of 233-468 Stack = -2.1 for stack of 446-465 Helix total = -2.1 Internal/bulge = 3.3 for closure of 447-464 Size = 2 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -2.2 for stack of 255-444 Stack = -0.9 for stack of 256-443 Stack = -1.3 for stack of 257-442 Stack = -0.6 for stack of 258-441 Stack = -1.4 for stack of 259-440 Helix total = -6.4 Internal/bulge = 1.2 for closure of 260-439 Size = 2 Stack = -1.5 for stack of 262-437 Stack = -1.4 for stack of 263-436 Stack = -2.1 for stack of 264-435 Helix total = -5.0 Multiloop = -2.9 for closure of 265-434 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -1.4 for stack of 382-402 Stack = -0.9 for stack of 383-401 Helix total = -2.3 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.2 for stack of 354-380 Helix total = -2.2 Internal/bulge = 1.9 for closure of 355-379 Size = 3 Stack = -2.5 for stack of 358-377 Stack = -3.3 for stack of 359-376 Helix total = -5.8 Internal/bulge = 1.2 for closure of 360-375 Size = 4 Stack = -2.4 for stack of 363-372 Helix total = -2.4 Hairpin = 5.1 for closure of 364-371 Stack = -1.5 for stack of 337-348 Helix total = -1.5 Hairpin = 3.5 for closure of 338-347 Stack = -1.1 for stack of 286-335 Stack = -2.1 for stack of 287-334 Stack = -3.3 for stack of 288-333 Stack = -2.4 for stack of 289-332 Helix total = -8.9 Internal/bulge = 2.6 for closure of 290-331 Size = 6 Stack = -0.9 for stack of 294-327 Stack = -0.9 for stack of 295-326 Helix total = -1.8 Internal/bulge = 2.6 for closure of 296-325 Size = 3 Stack = -1.1 for stack of 299-323 Stack = -1.3 for stack of 300-322 Stack = -0.6 for stack of 301-321 Helix total = -3.0 Hairpin = 6.6 for closure of 302-320 Stack = -3.3 for stack of 266-284 Helix total = -3.3 Hairpin = 5.4 for closure of 267-283 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.1 for stack of 130-145 Helix total = -2.1 Internal/bulge = 1.2 for closure of 131-144 Size = 2 Stack = -3.3 for stack of 133-142 Stack = -2.1 for stack of 134-141 Helix total = -5.4 Hairpin = 5.1 for closure of 135-140 Stack = -1.0 for stack of 114-127 Stack = -1.4 for stack of 115-126 Stack = -2.4 for stack of 116-125 Stack = -3.3 for stack of 117-124 Helix total = -8.1 Hairpin = 3.5 for closure of 118-123 Stack = -2.1 for stack of 2-105 Stack = -3.3 for stack of 3-104 Stack = -3.4 for stack of 4-103 Stack = -2.1 for stack of 5-102 Stack = -2.1 for stack of 6-101 Helix total = -13.0 Multiloop = 7.4 for closure of 7-100 Stack = -1.3 for stack of 80-89 Stack = -2.1 for stack of 81-88 Helix total = -3.4 Hairpin = 4.1 for closure of 82-87 Stack = -3.3 for stack of 10-73 Stack = -2.1 for stack of 11-72 Stack = -1.4 for stack of 12-71 Helix total = -6.8 Internal/bulge = 3.8 for closure of 13-70 Size = 2 Stack = -2.1 for stack of 16-69 Stack = -2.4 for stack of 17-68 Stack = -2.1 for stack of 18-67 Stack = -2.2 for stack of 19-66 Stack = -1.3 for stack of 20-65 Stack = -2.2 for stack of 21-64 Helix total = -12.3 Internal/bulge = 2.2 for closure of 22-63 Size = 3 Stack = -1.4 for stack of 25-61 Stack = -1.3 for stack of 26-60 Stack = -0.9 for stack of 27-59 Helix total = -3.6 Internal/bulge = 2.9 for closure of 28-58 Size = 1 BP stack across bulge = -0.9 Stack = -2.1 for stack of 30-57 Stack = -1.5 for stack of 31-56 Helix total = -3.6 Internal/bulge = 1.8 for closure of 32-55 Size = 8 Stack = -3.4 for stack of 37-50 Helix total = -3.4 Hairpin = 4.4 for closure of 38-49 Total energy = -170.4 Thermodynamic details for structure # 11 Exterior loop = -0.1 Stack = -1.3 for stack of 13-1002 Stack = 0.3 for stack of 14-1001 Stack = -1.3 for stack of 15-1000 Stack = -2.1 for stack of 16-999 Stack = -2.4 for stack of 17-998 Helix total = -6.8 Multiloop = 5.2 for closure of 18-997 Stack = -0.9 for stack of 57-996 Stack = -1.3 for stack of 58-995 Stack = -1.0 for stack of 59-994 Stack = -1.4 for stack of 60-993 Helix total = -4.6 Multiloop = 6.9 for closure of 61-992 Stack = -0.9 for stack of 953-991 Stack = -0.6 for stack of 954-990 Helix total = -1.5 Internal/bulge = -0.2 for closure of 955-989 Size = 2 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 66-951 Stack = -2.4 for stack of 67-950 Stack = -2.1 for stack of 68-949 Stack = -2.1 for stack of 69-948 Stack = -2.2 for stack of 70-947 Stack = -1.0 for stack of 71-946 Stack = -2.1 for stack of 72-945 Stack = -3.4 for stack of 73-944 Helix total = -17.4 Multiloop = 5.5 for closure of 74-943 Stack = -1.1 for stack of 330-942 Stack = -2.4 for stack of 331-941 Stack = -3.3 for stack of 332-940 Stack = -2.1 for stack of 333-939 Stack = -1.1 for stack of 334-938 Helix total = -10.0 Multiloop = -3.0 for closure of 335-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 438-919 Stack = -1.1 for stack of 439-918 Stack = -0.9 for stack of 440-917 Stack = -1.3 for stack of 441-916 Stack = -0.9 for stack of 442-915 Helix total = -6.3 Multiloop = 1.9 for closure of 443-914 Stack = -3.3 for stack of 904-912 Helix total = -3.3 Hairpin = 4.6 for closure of 905-911 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -1.4 for stack of 382-402 Stack = -0.9 for stack of 383-401 Helix total = -2.3 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.2 for stack of 354-380 Helix total = -2.2 Internal/bulge = 1.9 for closure of 355-379 Size = 3 Stack = -2.5 for stack of 358-377 Stack = -3.3 for stack of 359-376 Helix total = -5.8 Internal/bulge = 1.2 for closure of 360-375 Size = 4 Stack = -2.4 for stack of 363-372 Helix total = -2.4 Hairpin = 5.1 for closure of 364-371 Stack = -1.5 for stack of 337-348 Helix total = -1.5 Hairpin = 3.5 for closure of 338-347 Stack = -0.9 for stack of 296-327 Stack = -0.6 for stack of 297-326 Helix total = -1.5 Internal/bulge = 2.5 for closure of 298-325 Size = 1 BP stack across bulge = -1.3 Stack = -1.1 for stack of 299-323 Stack = -1.3 for stack of 300-322 Stack = -0.6 for stack of 301-321 Helix total = -3.0 Hairpin = 6.6 for closure of 302-320 Stack = -2.4 for stack of 86-294 Stack = -2.1 for stack of 87-293 Stack = -0.9 for stack of 88-292 Stack = -0.9 for stack of 89-291 Helix total = -6.3 Multiloop = 6.6 for closure of 90-290 Stack = -3.3 for stack of 266-289 Stack = -2.1 for stack of 267-288 Stack = -1.1 for stack of 268-287 Helix total = -6.5 Internal/bulge = 1.9 for closure of 269-286 Size = 3 Stack = -3.3 for stack of 272-284 Helix total = -3.3 Hairpin = 4.9 for closure of 273-283 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Stack = -3.4 for stack of 37-50 Helix total = -3.4 Hairpin = 4.4 for closure of 38-49 Stack = -2.5 for stack of 19-35 Stack = -1.0 for stack of 20-34 Stack = -2.2 for stack of 21-33 Stack = -2.1 for stack of 22-32 Stack = -0.6 for stack of 23-31 Stack = -2.1 for stack of 24-30 Helix total = -10.5 Hairpin = 5.4 for closure of 25-29 Stack = -2.1 for stack of 2-12 Stack = -3.3 for stack of 3-11 Helix total = -5.4 Hairpin = 4.6 for closure of 4-10 Total energy = -166.5 Thermodynamic details for structure # 12 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 5.7 for closure of 377-996 Stack = -0.9 for stack of 953-991 Stack = -0.6 for stack of 954-990 Helix total = -1.5 Internal/bulge = -0.2 for closure of 955-989 Size = 2 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.2 for stack of 379-947 Stack = -1.3 for stack of 380-946 Stack = -2.1 for stack of 381-945 Helix total = -5.6 Multiloop = 3.6 for closure of 382-944 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Stack = -1.1 for stack of 439-938 Helix total = -12.1 Multiloop = 3.4 for closure of 440-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 461-919 Stack = -1.1 for stack of 462-918 Stack = -0.9 for stack of 463-917 Stack = -1.0 for stack of 464-916 Stack = -1.3 for stack of 465-915 Helix total = -6.4 Multiloop = 4.8 for closure of 466-914 Stack = -2.2 for stack of 898-911 Stack = -2.4 for stack of 899-910 Stack = -2.1 for stack of 900-909 Stack = -0.9 for stack of 901-908 Helix total = -7.6 Hairpin = 5.3 for closure of 902-907 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -168.0 Thermodynamic details for structure # 13 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Stack = -1.1 for stack of 439-938 Helix total = -12.1 Multiloop = 3.4 for closure of 440-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 461-919 Stack = -1.1 for stack of 462-918 Stack = -0.9 for stack of 463-917 Helix total = -4.1 Multiloop = 2.2 for closure of 464-916 Stack = -0.9 for stack of 804-915 Stack = -1.1 for stack of 805-914 Stack = -2.1 for stack of 806-913 Stack = -3.3 for stack of 807-912 Helix total = -7.4 Internal/bulge = 0.4 for closure of 808-911 Size = 1 BP stack across bulge = -3.4 Stack = -2.1 for stack of 809-909 Stack = -0.6 for stack of 810-908 Stack = -1.4 for stack of 811-907 Helix total = -4.1 Internal/bulge = -0.2 for closure of 812-906 Size = 1 BP stack across bulge = -2.4 Stack = -3.3 for stack of 814-905 Stack = -2.1 for stack of 815-904 Stack = -0.9 for stack of 816-903 Helix total = -6.3 Multiloop = 3.6 for closure of 817-902 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -2.4 for stack of 867-881 Helix total = -2.4 Hairpin = 4.3 for closure of 868-880 Stack = -2.2 for stack of 854-866 Stack = -2.1 for stack of 855-865 Stack = -2.1 for stack of 856-864 Helix total = -6.4 Hairpin = 5.0 for closure of 857-863 Stack = -2.1 for stack of 819-853 Stack = -2.4 for stack of 820-852 Helix total = -4.5 Internal/bulge = 2.3 for closure of 821-851 Size = 1 BP stack across bulge = -1.1 Stack = -1.0 for stack of 822-849 Stack = -2.1 for stack of 823-848 Stack = -2.4 for stack of 824-847 Stack = -1.4 for stack of 825-846 Stack = -1.5 for stack of 826-845 Helix total = -8.4 Hairpin = 5.6 for closure of 827-844 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -0.9 for stack of 604-614 Helix total = -0.9 Hairpin = 5.5 for closure of 605-613 Stack = -2.2 for stack of 466-599 Stack = -2.1 for stack of 467-598 Stack = -0.9 for stack of 468-597 Helix total = -5.2 Internal/bulge = 3.2 for closure of 469-596 Size = 1 BP stack across bulge = -0.6 Stack = -2.1 for stack of 470-594 Stack = -3.4 for stack of 471-593 Stack = -2.1 for stack of 472-592 Stack = -0.9 for stack of 473-591 Stack = -2.1 for stack of 474-590 Helix total = -10.6 Multiloop = 7.9 for closure of 475-589 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -167.0 Thermodynamic details for structure # 14 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Helix total = -11.0 Multiloop = 1.5 for closure of 439-938 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -0.9 for stack of 804-915 Stack = -1.1 for stack of 805-914 Stack = -2.1 for stack of 806-913 Stack = -3.3 for stack of 807-912 Helix total = -7.4 Internal/bulge = 0.4 for closure of 808-911 Size = 1 BP stack across bulge = -3.4 Stack = -2.1 for stack of 809-909 Stack = -0.6 for stack of 810-908 Stack = -1.4 for stack of 811-907 Stack = -2.4 for stack of 812-906 Stack = -3.3 for stack of 813-905 Helix total = -9.8 Multiloop = 2.6 for closure of 814-904 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Helix total = 0.0 Internal/bulge = 0.1 for closure of 861-881 Size = 1 BP stack across bulge = -2.4 Stack = -2.1 for stack of 863-880 Stack = -2.1 for stack of 864-879 Helix total = -4.2 Internal/bulge = 0.3 for closure of 865-878 Size = 1 BP stack across bulge = -2.2 Stack = -0.9 for stack of 866-876 Helix total = -0.9 Hairpin = 5.8 for closure of 867-875 Stack = -2.1 for stack of 815-857 Helix total = -2.1 Internal/bulge = 2.8 for closure of 816-856 Size = 4 Stack = -2.1 for stack of 819-853 Stack = -2.4 for stack of 820-852 Helix total = -4.5 Internal/bulge = 2.3 for closure of 821-851 Size = 1 BP stack across bulge = -1.1 Stack = -1.0 for stack of 822-849 Stack = -2.1 for stack of 823-848 Stack = -2.4 for stack of 824-847 Stack = -1.4 for stack of 825-846 Stack = -1.5 for stack of 826-845 Helix total = -8.4 Hairpin = 5.6 for closure of 827-844 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -0.9 for stack of 468-605 Stack = -2.1 for stack of 469-604 Helix total = -3.0 Multiloop = 2.1 for closure of 470-603 Stack = -0.6 for stack of 500-601 Stack = -1.0 for stack of 501-600 Stack = -2.5 for stack of 502-599 Stack = -2.1 for stack of 503-598 Stack = -0.6 for stack of 504-597 Stack = -2.5 for stack of 505-596 Helix total = -9.3 Internal/bulge = 3.3 for closure of 506-595 Size = 2 Stack = -2.1 for stack of 509-594 Stack = -3.4 for stack of 510-593 Stack = -2.1 for stack of 511-592 Helix total = -7.6 Internal/bulge = 1.2 for closure of 512-591 Size = 2 Stack = -3.3 for stack of 514-589 Stack = -2.2 for stack of 515-588 Helix total = -5.5 Internal/bulge = 1.9 for closure of 516-587 Size = 2 Stack = -1.3 for stack of 518-585 Helix total = -1.3 Multiloop = 6.0 for closure of 519-584 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -1.0 for stack of 522-544 Helix total = -1.0 Internal/bulge = 1.2 for closure of 523-543 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 525-542 Stack = -0.6 for stack of 526-541 Stack = -1.4 for stack of 527-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -9.5 Hairpin = 4.1 for closure of 531-536 Stack = -3.4 for stack of 487-494 Helix total = -3.4 Hairpin = 4.1 for closure of 488-493 Stack = -2.1 for stack of 472-486 Stack = -0.6 for stack of 473-485 Stack = -2.1 for stack of 474-484 Helix total = -4.8 Hairpin = 4.9 for closure of 475-483 Stack = -1.3 for stack of 440-466 Stack = -1.0 for stack of 441-465 Stack = -0.9 for stack of 442-464 Helix total = -3.2 Internal/bulge = 1.6 for closure of 443-463 Size = 4 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -175.4 Thermodynamic details for structure # 15 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Stack = -1.1 for stack of 439-938 Helix total = -12.1 Multiloop = 2.8 for closure of 440-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -1.1 for stack of 906-918 Stack = -0.9 for stack of 907-917 Stack = -1.0 for stack of 908-916 Stack = -1.3 for stack of 909-915 Helix total = -4.3 Hairpin = 5.9 for closure of 910-914 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -173.5 Thermodynamic details for structure # 16 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Stack = -1.1 for stack of 439-938 Helix total = -12.1 Multiloop = 3.4 for closure of 440-937 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 461-919 Stack = -1.1 for stack of 462-918 Stack = -0.9 for stack of 463-917 Helix total = -4.1 Multiloop = 2.2 for closure of 464-916 Stack = -0.9 for stack of 804-915 Stack = -1.1 for stack of 805-914 Stack = -2.1 for stack of 806-913 Stack = -3.3 for stack of 807-912 Helix total = -7.4 Internal/bulge = 0.4 for closure of 808-911 Size = 1 BP stack across bulge = -3.4 Stack = -2.1 for stack of 809-909 Stack = -0.6 for stack of 810-908 Stack = -1.4 for stack of 811-907 Helix total = -4.1 Internal/bulge = -0.2 for closure of 812-906 Size = 1 BP stack across bulge = -2.4 Stack = -3.3 for stack of 814-905 Stack = -2.1 for stack of 815-904 Stack = -0.9 for stack of 816-903 Helix total = -6.3 Multiloop = 3.6 for closure of 817-902 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -2.4 for stack of 867-881 Helix total = -2.4 Hairpin = 4.3 for closure of 868-880 Stack = -2.2 for stack of 854-866 Stack = -2.1 for stack of 855-865 Stack = -2.1 for stack of 856-864 Helix total = -6.4 Hairpin = 5.0 for closure of 857-863 Stack = -2.1 for stack of 819-853 Stack = -2.4 for stack of 820-852 Helix total = -4.5 Internal/bulge = 2.3 for closure of 821-851 Size = 1 BP stack across bulge = -1.1 Stack = -1.0 for stack of 822-849 Stack = -2.1 for stack of 823-848 Stack = -2.4 for stack of 824-847 Stack = -1.4 for stack of 825-846 Stack = -1.5 for stack of 826-845 Helix total = -8.4 Hairpin = 5.6 for closure of 827-844 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -0.9 for stack of 604-614 Helix total = -0.9 Hairpin = 5.5 for closure of 605-613 Stack = -2.2 for stack of 466-599 Stack = -2.1 for stack of 467-598 Stack = -0.9 for stack of 468-597 Helix total = -5.2 Internal/bulge = 3.2 for closure of 469-596 Size = 1 BP stack across bulge = -0.6 Stack = -2.1 for stack of 470-594 Stack = -3.4 for stack of 471-593 Stack = -2.1 for stack of 472-592 Stack = -0.9 for stack of 473-591 Stack = -2.1 for stack of 474-590 Helix total = -10.6 Multiloop = 6.1 for closure of 475-589 Stack = -2.2 for stack of 542-588 Helix total = -2.2 Internal/bulge = 1.9 for closure of 543-587 Size = 5 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.2 for stack of 482-533 Stack = -2.1 for stack of 483-532 Stack = -2.1 for stack of 484-531 Stack = -1.5 for stack of 485-530 Stack = -0.5 for stack of 486-529 Stack = -2.5 for stack of 487-528 Helix total = -10.9 Internal/bulge = 3.0 for closure of 488-527 Size = 8 Stack = -2.5 for stack of 493-522 Helix total = -2.5 Internal/bulge = 4.5 for closure of 494-521 Size = 5 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -171.8 Thermodynamic details for structure # 17 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = 0.4 for closure of 377-996 Stack = -1.0 for stack of 945-994 Stack = -2.2 for stack of 946-993 Stack = -2.1 for stack of 947-992 Stack = -0.6 for stack of 948-991 Stack = -1.3 for stack of 949-990 Helix total = -7.2 Internal/bulge = 5.8 for closure of 950-989 Size = 7 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 434-943 Stack = -1.1 for stack of 435-942 Stack = -2.4 for stack of 436-941 Stack = -3.3 for stack of 437-940 Stack = -2.1 for stack of 438-939 Helix total = -11.0 Multiloop = 1.5 for closure of 439-938 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -0.9 for stack of 804-915 Stack = -1.1 for stack of 805-914 Stack = -2.1 for stack of 806-913 Stack = -3.3 for stack of 807-912 Helix total = -7.4 Internal/bulge = 0.4 for closure of 808-911 Size = 1 BP stack across bulge = -3.4 Stack = -2.1 for stack of 809-909 Stack = -0.6 for stack of 810-908 Stack = -1.4 for stack of 811-907 Helix total = -4.1 Internal/bulge = -0.2 for closure of 812-906 Size = 1 BP stack across bulge = -2.4 Stack = -3.3 for stack of 814-905 Stack = -2.1 for stack of 815-904 Stack = -0.9 for stack of 816-903 Helix total = -6.3 Multiloop = 3.6 for closure of 817-902 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -2.4 for stack of 867-881 Helix total = -2.4 Hairpin = 4.3 for closure of 868-880 Stack = -2.2 for stack of 854-866 Stack = -2.1 for stack of 855-865 Stack = -2.1 for stack of 856-864 Helix total = -6.4 Hairpin = 5.0 for closure of 857-863 Stack = -2.1 for stack of 819-853 Stack = -2.4 for stack of 820-852 Helix total = -4.5 Internal/bulge = 2.3 for closure of 821-851 Size = 1 BP stack across bulge = -1.1 Stack = -1.0 for stack of 822-849 Stack = -2.1 for stack of 823-848 Stack = -2.4 for stack of 824-847 Stack = -1.4 for stack of 825-846 Stack = -1.5 for stack of 826-845 Helix total = -8.4 Hairpin = 5.6 for closure of 827-844 Stack = -2.4 for stack of 611-803 Stack = -0.9 for stack of 612-802 Stack = -0.9 for stack of 613-801 Helix total = -4.2 Multiloop = 5.6 for closure of 614-800 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -0.9 for stack of 468-605 Stack = -2.1 for stack of 469-604 Helix total = -3.0 Multiloop = 2.1 for closure of 470-603 Stack = -0.6 for stack of 500-601 Stack = -1.0 for stack of 501-600 Stack = -2.5 for stack of 502-599 Stack = -2.1 for stack of 503-598 Stack = -0.6 for stack of 504-597 Stack = -2.5 for stack of 505-596 Helix total = -9.3 Internal/bulge = 3.3 for closure of 506-595 Size = 2 Stack = -2.1 for stack of 509-594 Stack = -3.4 for stack of 510-593 Stack = -2.1 for stack of 511-592 Helix total = -7.6 Internal/bulge = 1.2 for closure of 512-591 Size = 2 Stack = -3.3 for stack of 514-589 Stack = -2.2 for stack of 515-588 Helix total = -5.5 Internal/bulge = 1.9 for closure of 516-587 Size = 2 Stack = -1.3 for stack of 518-585 Helix total = -1.3 Multiloop = 6.0 for closure of 519-584 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -1.0 for stack of 522-544 Helix total = -1.0 Internal/bulge = 1.2 for closure of 523-543 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 525-542 Stack = -0.6 for stack of 526-541 Stack = -1.4 for stack of 527-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -9.5 Hairpin = 4.1 for closure of 531-536 Stack = -3.4 for stack of 487-494 Helix total = -3.4 Hairpin = 4.1 for closure of 488-493 Stack = -2.1 for stack of 472-486 Stack = -0.6 for stack of 473-485 Stack = -2.1 for stack of 474-484 Helix total = -4.8 Hairpin = 4.9 for closure of 475-483 Stack = -1.3 for stack of 440-466 Stack = -1.0 for stack of 441-465 Stack = -0.9 for stack of 442-464 Helix total = -3.2 Internal/bulge = 1.6 for closure of 443-463 Size = 4 Stack = -2.1 for stack of 446-460 Stack = -2.1 for stack of 447-459 Helix total = -4.2 Hairpin = 5.3 for closure of 448-458 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -175.1 Thermodynamic details for structure # 18 Exterior loop = -2.0 Stack = -2.4 for stack of 107-1002 Stack = -2.1 for stack of 108-1001 Helix total = -4.5 Multiloop = 5.5 for closure of 109-1000 Stack = -2.1 for stack of 932-999 Stack = -2.4 for stack of 933-998 Helix total = -4.5 Internal/bulge = 3.3 for closure of 934-997 Size = 5 Stack = -1.4 for stack of 937-993 Stack = 0.3 for stack of 938-992 Stack = -0.5 for stack of 939-991 Stack = -1.3 for stack of 940-990 Stack = -1.4 for stack of 941-989 Stack = -1.4 for stack of 942-988 Stack = -3.4 for stack of 943-987 Stack = -2.1 for stack of 944-986 Stack = -1.3 for stack of 945-985 Helix total = -12.5 Multiloop = 7.6 for closure of 946-984 Stack = -2.4 for stack of 961-970 Helix total = -2.4 Hairpin = 3.1 for closure of 962-969 Stack = -2.1 for stack of 950-959 Helix total = -2.1 Hairpin = 4.1 for closure of 951-958 Stack = -0.6 for stack of 146-931 Stack = -1.3 for stack of 147-930 Stack = -0.6 for stack of 148-929 Stack = -2.1 for stack of 149-928 Stack = -3.3 for stack of 150-927 Stack = -2.4 for stack of 151-926 Helix total = -10.3 Internal/bulge = 1.3 for closure of 152-925 Size = 1 BP stack across bulge = -2.1 Stack = -1.5 for stack of 154-924 Stack = -1.3 for stack of 155-923 Stack = -2.1 for stack of 156-922 Stack = -2.2 for stack of 157-921 Stack = -1.3 for stack of 158-920 Stack = 0.3 for stack of 159-919 Stack = -1.4 for stack of 160-918 Helix total = -9.5 Internal/bulge = 3.7 for closure of 161-917 Size = 3 Stack = -1.1 for stack of 163-914 Stack = -2.1 for stack of 164-913 Helix total = -3.2 Multiloop = 4.8 for closure of 165-912 Stack = -2.2 for stack of 898-911 Stack = -2.4 for stack of 899-910 Stack = -2.1 for stack of 900-909 Stack = -0.9 for stack of 901-908 Helix total = -7.6 Hairpin = 5.3 for closure of 902-907 Stack = -1.1 for stack of 218-885 Stack = -2.1 for stack of 219-884 Stack = -2.4 for stack of 220-883 Helix total = -5.6 Internal/bulge = 1.5 for closure of 221-882 Size = 4 Stack = -2.1 for stack of 224-879 Stack = -3.3 for stack of 225-878 Helix total = -5.4 Multiloop = 7.9 for closure of 226-877 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -0.6 for stack of 227-474 Stack = -2.1 for stack of 228-473 Stack = -3.4 for stack of 229-472 Stack = -2.1 for stack of 230-471 Stack = -0.6 for stack of 231-470 Stack = -0.9 for stack of 232-469 Helix total = -9.7 Multiloop = 5.4 for closure of 233-468 Stack = -2.1 for stack of 446-465 Helix total = -2.1 Internal/bulge = 3.3 for closure of 447-464 Size = 2 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -2.2 for stack of 255-444 Stack = -0.9 for stack of 256-443 Stack = -1.3 for stack of 257-442 Stack = -0.6 for stack of 258-441 Stack = -1.4 for stack of 259-440 Helix total = -6.4 Internal/bulge = 1.2 for closure of 260-439 Size = 2 Stack = -1.5 for stack of 262-437 Stack = -1.4 for stack of 263-436 Stack = -2.1 for stack of 264-435 Helix total = -5.0 Multiloop = -2.9 for closure of 265-434 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -1.4 for stack of 382-402 Stack = -0.9 for stack of 383-401 Helix total = -2.3 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.2 for stack of 354-380 Helix total = -2.2 Internal/bulge = 1.9 for closure of 355-379 Size = 3 Stack = -2.5 for stack of 358-377 Stack = -3.3 for stack of 359-376 Helix total = -5.8 Internal/bulge = 1.2 for closure of 360-375 Size = 4 Stack = -2.4 for stack of 363-372 Helix total = -2.4 Hairpin = 5.1 for closure of 364-371 Stack = -1.5 for stack of 337-348 Helix total = -1.5 Hairpin = 3.5 for closure of 338-347 Stack = -1.1 for stack of 286-335 Stack = -2.1 for stack of 287-334 Stack = -3.3 for stack of 288-333 Stack = -2.4 for stack of 289-332 Helix total = -8.9 Internal/bulge = 2.6 for closure of 290-331 Size = 6 Stack = -0.9 for stack of 294-327 Stack = -0.9 for stack of 295-326 Helix total = -1.8 Internal/bulge = 2.6 for closure of 296-325 Size = 3 Stack = -1.1 for stack of 299-323 Stack = -1.3 for stack of 300-322 Stack = -0.6 for stack of 301-321 Helix total = -3.0 Hairpin = 6.6 for closure of 302-320 Stack = -3.3 for stack of 266-284 Helix total = -3.3 Hairpin = 5.4 for closure of 267-283 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.1 for stack of 130-145 Helix total = -2.1 Internal/bulge = 1.2 for closure of 131-144 Size = 2 Stack = -3.3 for stack of 133-142 Stack = -2.1 for stack of 134-141 Helix total = -5.4 Hairpin = 5.1 for closure of 135-140 Stack = -1.0 for stack of 114-127 Stack = -1.4 for stack of 115-126 Stack = -2.4 for stack of 116-125 Stack = -3.3 for stack of 117-124 Helix total = -8.1 Hairpin = 3.5 for closure of 118-123 Stack = -2.1 for stack of 2-105 Stack = -3.3 for stack of 3-104 Stack = -3.4 for stack of 4-103 Stack = -2.1 for stack of 5-102 Stack = -2.1 for stack of 6-101 Helix total = -13.0 Multiloop = 7.4 for closure of 7-100 Stack = -1.3 for stack of 80-89 Stack = -2.1 for stack of 81-88 Helix total = -3.4 Hairpin = 4.1 for closure of 82-87 Stack = -3.3 for stack of 10-73 Stack = -2.1 for stack of 11-72 Stack = -1.4 for stack of 12-71 Helix total = -6.8 Internal/bulge = 3.8 for closure of 13-70 Size = 2 Stack = -2.1 for stack of 16-69 Stack = -2.4 for stack of 17-68 Stack = -2.1 for stack of 18-67 Stack = -2.2 for stack of 19-66 Stack = -1.3 for stack of 20-65 Stack = -2.2 for stack of 21-64 Helix total = -12.3 Internal/bulge = 2.2 for closure of 22-63 Size = 3 Stack = -1.4 for stack of 25-61 Stack = -1.3 for stack of 26-60 Stack = -0.9 for stack of 27-59 Helix total = -3.6 Internal/bulge = 2.9 for closure of 28-58 Size = 1 BP stack across bulge = -0.9 Stack = -2.1 for stack of 30-57 Stack = -1.5 for stack of 31-56 Helix total = -3.6 Internal/bulge = 1.8 for closure of 32-55 Size = 8 Stack = -3.4 for stack of 37-50 Helix total = -3.4 Hairpin = 4.4 for closure of 38-49 Total energy = -163.0 Thermodynamic details for structure # 19 Exterior loop = -1.0 Stack = -1.3 for stack of 949-1000 Stack = -2.1 for stack of 950-999 Stack = -2.4 for stack of 951-998 Helix total = -5.8 Internal/bulge = 5.0 for closure of 952-997 Size = 5 Stack = -0.9 for stack of 953-991 Stack = -0.6 for stack of 954-990 Helix total = -1.5 Internal/bulge = -0.2 for closure of 955-989 Size = 2 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 108-943 Stack = -1.1 for stack of 109-942 Stack = -2.4 for stack of 110-941 Stack = -3.3 for stack of 111-940 Helix total = -8.9 Multiloop = 4.0 for closure of 112-939 Stack = -0.6 for stack of 146-931 Stack = -1.3 for stack of 147-930 Stack = -0.6 for stack of 148-929 Stack = -2.1 for stack of 149-928 Stack = -3.3 for stack of 150-927 Stack = -2.4 for stack of 151-926 Helix total = -10.3 Internal/bulge = 1.3 for closure of 152-925 Size = 1 BP stack across bulge = -2.1 Stack = -1.5 for stack of 154-924 Stack = -1.3 for stack of 155-923 Stack = -2.1 for stack of 156-922 Stack = -2.2 for stack of 157-921 Stack = -1.3 for stack of 158-920 Stack = 0.3 for stack of 159-919 Stack = -1.4 for stack of 160-918 Helix total = -9.5 Multiloop = 5.7 for closure of 161-917 Stack = -0.9 for stack of 222-915 Stack = -1.1 for stack of 223-914 Stack = -2.1 for stack of 224-913 Stack = -3.3 for stack of 225-912 Helix total = -7.4 Multiloop = 5.4 for closure of 226-911 Stack = -2.1 for stack of 883-909 Helix total = -2.1 Internal/bulge = 1.6 for closure of 884-908 Size = 4 Stack = -3.3 for stack of 887-905 Stack = -2.1 for stack of 888-904 Helix total = -5.4 Internal/bulge = 1.9 for closure of 889-903 Size = 2 Stack = -2.1 for stack of 891-901 Stack = -2.4 for stack of 892-900 Helix total = -4.5 Hairpin = 4.6 for closure of 893-899 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -0.6 for stack of 227-474 Stack = -2.1 for stack of 228-473 Stack = -3.4 for stack of 229-472 Stack = -2.1 for stack of 230-471 Stack = -0.6 for stack of 231-470 Stack = -0.9 for stack of 232-469 Helix total = -9.7 Multiloop = 5.4 for closure of 233-468 Stack = -2.1 for stack of 446-465 Helix total = -2.1 Internal/bulge = 3.3 for closure of 447-464 Size = 2 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -2.2 for stack of 255-444 Stack = -0.9 for stack of 256-443 Stack = -1.3 for stack of 257-442 Stack = -0.6 for stack of 258-441 Stack = -1.4 for stack of 259-440 Helix total = -6.4 Internal/bulge = 1.2 for closure of 260-439 Size = 2 Stack = -1.5 for stack of 262-437 Stack = -1.4 for stack of 263-436 Stack = -2.1 for stack of 264-435 Helix total = -5.0 Multiloop = -2.9 for closure of 265-434 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -1.4 for stack of 382-402 Stack = -0.9 for stack of 383-401 Helix total = -2.3 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.2 for stack of 354-380 Helix total = -2.2 Internal/bulge = 1.9 for closure of 355-379 Size = 3 Stack = -2.5 for stack of 358-377 Stack = -3.3 for stack of 359-376 Helix total = -5.8 Internal/bulge = 1.2 for closure of 360-375 Size = 4 Stack = -2.4 for stack of 363-372 Helix total = -2.4 Hairpin = 5.1 for closure of 364-371 Stack = -1.5 for stack of 337-348 Helix total = -1.5 Hairpin = 3.5 for closure of 338-347 Stack = -1.1 for stack of 286-335 Stack = -2.1 for stack of 287-334 Stack = -3.3 for stack of 288-333 Stack = -2.4 for stack of 289-332 Helix total = -8.9 Internal/bulge = 2.6 for closure of 290-331 Size = 6 Stack = -0.9 for stack of 294-327 Stack = -0.9 for stack of 295-326 Helix total = -1.8 Internal/bulge = 2.6 for closure of 296-325 Size = 3 Stack = -1.1 for stack of 299-323 Stack = -1.3 for stack of 300-322 Stack = -0.6 for stack of 301-321 Helix total = -3.0 Hairpin = 6.6 for closure of 302-320 Stack = -3.3 for stack of 266-284 Helix total = -3.3 Hairpin = 5.4 for closure of 267-283 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -3.2 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.1 for stack of 130-145 Helix total = -2.1 Internal/bulge = 1.2 for closure of 131-144 Size = 2 Stack = -3.3 for stack of 133-142 Stack = -2.1 for stack of 134-141 Helix total = -5.4 Hairpin = 5.1 for closure of 135-140 Stack = -1.0 for stack of 114-127 Stack = -1.4 for stack of 115-126 Stack = -2.4 for stack of 116-125 Stack = -3.3 for stack of 117-124 Helix total = -8.1 Hairpin = 3.5 for closure of 118-123 Stack = -2.1 for stack of 2-105 Stack = -3.3 for stack of 3-104 Stack = -3.4 for stack of 4-103 Stack = -2.1 for stack of 5-102 Stack = -2.1 for stack of 6-101 Helix total = -13.0 Multiloop = 7.4 for closure of 7-100 Stack = -1.3 for stack of 80-89 Stack = -2.1 for stack of 81-88 Helix total = -3.4 Hairpin = 4.1 for closure of 82-87 Stack = -3.3 for stack of 10-73 Stack = -2.1 for stack of 11-72 Stack = -1.4 for stack of 12-71 Helix total = -6.8 Internal/bulge = 3.8 for closure of 13-70 Size = 2 Stack = -2.1 for stack of 16-69 Stack = -2.4 for stack of 17-68 Stack = -2.1 for stack of 18-67 Stack = -2.2 for stack of 19-66 Stack = -1.3 for stack of 20-65 Stack = -2.2 for stack of 21-64 Helix total = -12.3 Internal/bulge = 2.2 for closure of 22-63 Size = 3 Stack = -1.4 for stack of 25-61 Stack = -1.3 for stack of 26-60 Stack = -0.9 for stack of 27-59 Helix total = -3.6 Internal/bulge = 2.9 for closure of 28-58 Size = 1 BP stack across bulge = -0.9 Stack = -2.1 for stack of 30-57 Stack = -1.5 for stack of 31-56 Helix total = -3.6 Internal/bulge = 1.8 for closure of 32-55 Size = 8 Stack = -3.4 for stack of 37-50 Helix total = -3.4 Hairpin = 4.4 for closure of 38-49 Total energy = -172.9 Thermodynamic details for structure # 20 Exterior loop = -1.0 Stack = -1.3 for stack of 949-1000 Stack = -2.1 for stack of 950-999 Stack = -2.4 for stack of 951-998 Helix total = -5.8 Internal/bulge = 5.0 for closure of 952-997 Size = 5 Stack = -0.9 for stack of 953-991 Stack = -0.6 for stack of 954-990 Helix total = -1.5 Internal/bulge = -0.2 for closure of 955-989 Size = 2 Stack = -3.4 for stack of 957-987 Stack = -2.1 for stack of 958-986 Stack = -1.3 for stack of 959-985 Helix total = -6.8 Internal/bulge = 1.1 for closure of 960-984 Size = 4 Stack = -3.3 for stack of 963-981 Helix total = -3.3 Hairpin = 5.6 for closure of 964-980 Stack = -2.1 for stack of 108-943 Stack = -1.1 for stack of 109-942 Stack = -2.4 for stack of 110-941 Stack = -3.3 for stack of 111-940 Helix total = -8.9 Multiloop = 4.0 for closure of 112-939 Stack = -0.6 for stack of 146-931 Stack = -1.3 for stack of 147-930 Stack = -0.6 for stack of 148-929 Stack = -2.1 for stack of 149-928 Stack = -3.3 for stack of 150-927 Stack = -2.4 for stack of 151-926 Helix total = -10.3 Internal/bulge = 1.3 for closure of 152-925 Size = 1 BP stack across bulge = -2.1 Stack = -1.5 for stack of 154-924 Stack = -1.3 for stack of 155-923 Stack = -2.1 for stack of 156-922 Stack = -2.2 for stack of 157-921 Stack = -1.3 for stack of 158-920 Stack = 0.3 for stack of 159-919 Stack = -1.4 for stack of 160-918 Helix total = -9.5 Internal/bulge = 3.7 for closure of 161-917 Size = 3 Stack = -1.1 for stack of 163-914 Stack = -2.1 for stack of 164-913 Helix total = -3.2 Multiloop = 4.8 for closure of 165-912 Stack = -2.2 for stack of 898-911 Stack = -2.4 for stack of 899-910 Stack = -2.1 for stack of 900-909 Stack = -0.9 for stack of 901-908 Helix total = -7.6 Hairpin = 5.3 for closure of 902-907 Stack = -1.1 for stack of 218-885 Stack = -2.1 for stack of 219-884 Stack = -2.4 for stack of 220-883 Helix total = -5.6 Internal/bulge = 1.5 for closure of 221-882 Size = 4 Stack = -2.1 for stack of 224-879 Stack = -3.3 for stack of 225-878 Helix total = -5.4 Multiloop = 7.9 for closure of 226-877 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -0.6 for stack of 227-474 Stack = -2.1 for stack of 228-473 Stack = -3.4 for stack of 229-472 Stack = -2.1 for stack of 230-471 Stack = -0.6 for stack of 231-470 Stack = -0.9 for stack of 232-469 Helix total = -9.7 Multiloop = 5.4 for closure of 233-468 Stack = -2.1 for stack of 446-465 Helix total = -2.1 Internal/bulge = 3.3 for closure of 447-464 Size = 2 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -2.2 for stack of 255-444 Stack = -0.9 for stack of 256-443 Stack = -1.3 for stack of 257-442 Stack = -0.6 for stack of 258-441 Stack = -1.4 for stack of 259-440 Helix total = -6.4 Internal/bulge = 1.2 for closure of 260-439 Size = 2 Stack = -1.5 for stack of 262-437 Stack = -1.4 for stack of 263-436 Stack = -2.1 for stack of 264-435 Helix total = -5.0 Multiloop = -2.1 for closure of 265-434 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -1.4 for stack of 382-402 Stack = -0.9 for stack of 383-401 Helix total = -2.3 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.2 for stack of 354-380 Helix total = -2.2 Internal/bulge = 1.9 for closure of 355-379 Size = 3 Stack = -2.5 for stack of 358-377 Stack = -3.3 for stack of 359-376 Helix total = -5.8 Internal/bulge = 1.2 for closure of 360-375 Size = 4 Stack = -2.4 for stack of 363-372 Helix total = -2.4 Hairpin = 5.1 for closure of 364-371 Stack = -1.1 for stack of 334-351 Helix total = -1.1 Internal/bulge = -1.4 for closure of 335-350 Size = 2 Stack = -1.5 for stack of 337-348 Helix total = -1.5 Hairpin = 3.5 for closure of 338-347 Stack = -2.4 for stack of 298-332 Stack = -1.1 for stack of 299-331 Stack = -0.9 for stack of 300-330 Stack = -0.9 for stack of 301-329 Stack = -1.3 for stack of 302-328 Helix total = -6.6 Internal/bulge = 2.3 for closure of 303-327 Size = 9 Stack = -2.1 for stack of 308-321 Helix total = -2.1 Hairpin = 5.0 for closure of 309-320 Stack = -3.3 for stack of 266-289 Stack = -2.1 for stack of 267-288 Stack = -1.1 for stack of 268-287 Helix total = -6.5 Internal/bulge = 1.9 for closure of 269-286 Size = 3 Stack = -3.3 for stack of 272-284 Helix total = -3.3 Hairpin = 4.9 for closure of 273-283 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.1 for stack of 130-145 Helix total = -2.1 Internal/bulge = 1.2 for closure of 131-144 Size = 2 Stack = -3.3 for stack of 133-142 Stack = -2.1 for stack of 134-141 Helix total = -5.4 Hairpin = 5.1 for closure of 135-140 Stack = -1.0 for stack of 114-127 Stack = -1.4 for stack of 115-126 Stack = -2.4 for stack of 116-125 Stack = -3.3 for stack of 117-124 Helix total = -8.1 Hairpin = 3.5 for closure of 118-123 Stack = -2.1 for stack of 2-105 Stack = -3.3 for stack of 3-104 Stack = -3.4 for stack of 4-103 Stack = -2.1 for stack of 5-102 Stack = -2.1 for stack of 6-101 Helix total = -13.0 Multiloop = 7.4 for closure of 7-100 Stack = -1.3 for stack of 80-89 Stack = -2.1 for stack of 81-88 Helix total = -3.4 Hairpin = 4.1 for closure of 82-87 Stack = -3.3 for stack of 10-73 Stack = -2.1 for stack of 11-72 Stack = -1.4 for stack of 12-71 Helix total = -6.8 Internal/bulge = 3.8 for closure of 13-70 Size = 2 Stack = -2.1 for stack of 16-69 Stack = -2.4 for stack of 17-68 Stack = -2.1 for stack of 18-67 Stack = -2.2 for stack of 19-66 Stack = -1.3 for stack of 20-65 Stack = -2.2 for stack of 21-64 Helix total = -12.3 Internal/bulge = 2.2 for closure of 22-63 Size = 3 Stack = -1.4 for stack of 25-61 Stack = -1.3 for stack of 26-60 Stack = -0.9 for stack of 27-59 Helix total = -3.6 Internal/bulge = 2.9 for closure of 28-58 Size = 1 BP stack across bulge = -0.9 Stack = -2.1 for stack of 30-57 Stack = -1.5 for stack of 31-56 Helix total = -3.6 Internal/bulge = 1.8 for closure of 32-55 Size = 8 Stack = -3.4 for stack of 37-50 Helix total = -3.4 Hairpin = 4.4 for closure of 38-49 Total energy = -176.7
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efn2.txt
Command Line:
efn2
Fold.ct
efn2.txt
--temperature 310.15 --writedetails