Pseudoknot Energy Details for Structure 1:
	Knotted Pairs:
	    12:1143 13:1142 14:1141 552:573 553:572 554:571
	Energy of Broken Structure: -258.4
	Energy of Pseudo-Helices:   -12.4
	Pseudoknot Energy Penalty:  14.7
	Total Free Energy:          -256.1
Details follow for Broken (Pseudoknot-free) Structure.
Thermodynamic details for structure # 1
	Exterior loop = -9.4
		Stack = -0.6  for stack of 1771-1794
		Stack = -0.9  for stack of 1772-1793
		Stack = -2.4  for stack of 1773-1792
		Stack = -3.3  for stack of 1774-1791
		Stack = -2.4  for stack of 1775-1790
		Stack = -2.5  for stack of 1776-1789
		Stack = -1.0  for stack of 1777-1788
		Stack = -2.1  for stack of 1778-1787
		Stack = -3.3  for stack of 1779-1786
	Helix total = -18.5
	Hairpin = 4.5  for closure of 1780-1785
	Helix total = 0.0
	Internal/bulge = 2.3  for closure of 1638-1769	Size = 3
	Helix total = 0.0
	Internal/bulge = 2.6  for closure of 1640-1766	Size = 5
		Stack = -2.4  for stack of 1643-1762
	Helix total = -2.4
	Internal/bulge = -0.6  for closure of 1644-1761	Size = 2
	Helix total = 0.0
	Internal/bulge = 2.2  for closure of 1646-1759	Size = 5
		Stack = -1.3  for stack of 1649-1755
		Stack = -2.1  for stack of 1650-1754
		Stack = -2.2  for stack of 1651-1753
	Helix total = -5.6
	Internal/bulge = 1.2  for closure of 1652-1752	Size = 2
		Stack = -3.3  for stack of 1654-1750
	Helix total = -3.3
	Internal/bulge = -0.2  for closure of 1655-1749	Size = 4
	Helix total = 0.0
	Internal/bulge = 2.4  for closure of 1658-1746	Size = 1 BP stack across bulge = -1.0
		Stack = -1.3  for stack of 1660-1745
		Stack = -0.9  for stack of 1661-1744
		Stack = -1.1  for stack of 1662-1743
		Stack = -2.1  for stack of 1663-1742
		Stack = -1.5  for stack of 1664-1741
		Stack = -2.5  for stack of 1665-1740
		Stack = -2.1  for stack of 1666-1739
	Helix total = -11.5
	Internal/bulge = 1.9  for closure of 1667-1738	Size = 2
		Stack = -2.1  for stack of 1669-1736
		Stack = -2.2  for stack of 1670-1735
	Helix total = -4.3
	Internal/bulge = 0.9  for closure of 1671-1734	Size = 4
	Helix total = 0.0
	Internal/bulge = 0.5  for closure of 1674-1731	Size = 2
		Stack = -3.3  for stack of 1676-1729
	Helix total = -3.3
	Internal/bulge = 1.2  for closure of 1677-1728	Size = 4
	Helix total = 0.0
	Internal/bulge = 1.4  for closure of 1680-1725	Size = 6
		Stack = -2.4  for stack of 1684-1721
		Stack = -2.1  for stack of 1685-1720
		Stack = -1.4  for stack of 1686-1719
		Stack = -3.4  for stack of 1687-1718
		Stack = -2.1  for stack of 1688-1717
		Stack = -1.3  for stack of 1689-1716
	Helix total = -12.7
	Internal/bulge = 2.2  for closure of 1690-1715	Size = 2
		Stack = -2.4  for stack of 1692-1713
		Stack = -2.1  for stack of 1693-1712
		Stack = -2.4  for stack of 1694-1711
	Helix total = -6.9
	Internal/bulge = 1.2  for closure of 1695-1710	Size = 2
		Stack = -3.3  for stack of 1697-1708
		Stack = -1.5  for stack of 1698-1707
		Stack = -2.1  for stack of 1699-1706
	Helix total = -6.9
	Hairpin = 3.1  for closure of 1700-1705
		Stack = -2.1  for stack of 1146-1635
	Helix total = -2.1
	Internal/bulge = 1.4  for closure of 1147-1634	Size = 1 BP stack across bulge = -2.4
		Stack = -2.2  for stack of 1148-1632
		Stack = -1.4  for stack of 1149-1631
	Helix total = -3.6
	Internal/bulge = 2.1  for closure of 1150-1630	Size = 1 BP stack across bulge = -1.3
		Stack = -0.9  for stack of 1152-1629
		Stack = -2.1  for stack of 1153-1628
		Stack = -3.3  for stack of 1154-1627
		Stack = -3.3  for stack of 1155-1626
		Stack = -3.4  for stack of 1156-1625
		Stack = -2.1  for stack of 1157-1624
	Helix total = -15.1
	Multiloop = 9.2  for closure of 1158-1623
		Stack = -0.6  for stack of 1589-1611
		Stack = -2.5  for stack of 1590-1610
		Stack = -2.4  for stack of 1591-1609
		Stack = -3.4  for stack of 1592-1608
		Stack = -2.1  for stack of 1593-1607
		Stack = -0.9  for stack of 1594-1606
		Stack = -2.1  for stack of 1595-1605
	Helix total = -14.0
	Hairpin = 4.9  for closure of 1596-1604
		Stack = -2.1  for stack of 1164-1584
		Stack = -3.3  for stack of 1165-1583
		Stack = -2.4  for stack of 1166-1582
		Stack = -0.6  for stack of 1167-1581
		Stack = -1.4  for stack of 1168-1580
	Helix total = -9.8
	Multiloop = 5.0  for closure of 1169-1579
	Helix total = 0.0
	Internal/bulge = 1.4  for closure of 1542-1573	Size = 8
		Stack = -2.1  for stack of 1547-1568
		Stack = -2.4  for stack of 1548-1567
		Stack = -2.1  for stack of 1549-1566
		Stack = -3.4  for stack of 1550-1565
		Stack = -2.1  for stack of 1551-1564
	Helix total = -12.1
	Hairpin = 5.3  for closure of 1552-1563
		Stack = -2.4  for stack of 1476-1535
		Stack = -2.2  for stack of 1477-1534
		Stack = -2.4  for stack of 1478-1533
		Stack = -3.3  for stack of 1479-1532
		Stack = -2.4  for stack of 1480-1531
		Stack = -2.1  for stack of 1481-1530
	Helix total = -14.8
	Internal/bulge = 3.9  for closure of 1482-1529	Size = 11
		Stack = -1.3  for stack of 1488-1522
		Stack = -2.1  for stack of 1489-1521
	Helix total = -3.4
	Internal/bulge = 2.8  for closure of 1490-1520	Size = 7
		Stack = -2.2  for stack of 1495-1516
		Stack = -3.3  for stack of 1496-1515
	Helix total = -5.5
	Internal/bulge = -0.4  for closure of 1497-1514	Size = 4
		Stack = -1.5  for stack of 1500-1511
		Stack = -2.5  for stack of 1501-1510
		Stack = -3.3  for stack of 1502-1509
	Helix total = -7.3
	Hairpin = 3.3  for closure of 1503-1508
		Stack = -2.1  for stack of 1172-1470
		Stack = -3.4  for stack of 1173-1469
	Helix total = -5.5
	Internal/bulge = 1.2  for closure of 1174-1468	Size = 2
		Stack = -1.4  for stack of 1176-1466
		Stack = -3.4  for stack of 1177-1465
		Stack = -2.4  for stack of 1178-1464
	Helix total = -7.2
	Internal/bulge = 0.5  for closure of 1179-1463	Size = 1 BP stack across bulge = -3.3
		Stack = -3.4  for stack of 1180-1461
	Helix total = -3.4
	Multiloop = 6.7  for closure of 1181-1460
		Stack = -3.3  for stack of 1210-1456
		Stack = -2.1  for stack of 1211-1455
		Stack = -2.1  for stack of 1212-1454
		Stack = -1.5  for stack of 1213-1453
	Helix total = -9.0
	Internal/bulge = 1.5  for closure of 1214-1452	Size = 2
	Helix total = 0.0
	Multiloop = 6.4  for closure of 1216-1450
		Stack = -2.1  for stack of 1268-1444
	Helix total = -2.1
	Internal/bulge = 0.5  for closure of 1269-1443	Size = 1 BP stack across bulge = -3.3
		Stack = -3.3  for stack of 1271-1442
		Stack = -2.5  for stack of 1272-1441
		Stack = 0.3  for stack of 1273-1440
	Helix total = -5.5
	Internal/bulge = 3.8  for closure of 1274-1439	Size = 2
	Helix total = 0.0
	Internal/bulge = 2.8  for closure of 1277-1438	Size = 1 BP stack across bulge = -1.0
	Helix total = 0.0
	Internal/bulge = 4.2  for closure of 1278-1436	Size = 3
		Stack = -2.5  for stack of 1279-1432
		Stack = -3.3  for stack of 1280-1431
	Helix total = -5.8
	Internal/bulge = 1.4  for closure of 1281-1430	Size = 1 BP stack across bulge = -2.4
		Stack = -2.2  for stack of 1282-1428
	Helix total = -2.2
	Internal/bulge = 2.3  for closure of 1283-1427	Size = 1 BP stack across bulge = -0.9
	Helix total = 0.0
	Internal/bulge = 1.9  for closure of 1285-1426	Size = 2
	Helix total = 0.0
	Multiloop = 6.1  for closure of 1287-1424
		Stack = -2.1  for stack of 1335-1420
		Stack = -1.3  for stack of 1336-1419
		Stack = -1.0  for stack of 1337-1418
		Stack = -0.9  for stack of 1338-1417
	Helix total = -5.3
	Multiloop = 6.5  for closure of 1339-1416
		Stack = -2.1  for stack of 1391-1411
		Stack = -1.0  for stack of 1392-1410
		Stack = -1.1  for stack of 1393-1409
		Stack = -2.4  for stack of 1394-1408
		Stack = -2.4  for stack of 1395-1407
		Stack = -3.3  for stack of 1396-1406
		Stack = -2.5  for stack of 1397-1405
	Helix total = -14.8
	Hairpin = 5.5  for closure of 1398-1404
		Stack = -3.3  for stack of 1340-1388
		Stack = -2.1  for stack of 1341-1387
	Helix total = -5.4
	Internal/bulge = 1.4  for closure of 1342-1386	Size = 1 BP stack across bulge = -2.4
		Stack = -2.1  for stack of 1344-1385
		Stack = -1.3  for stack of 1345-1384
		Stack = -0.9  for stack of 1346-1383
	Helix total = -4.3
	Internal/bulge = 1.8  for closure of 1347-1382	Size = 4
		Stack = -2.1  for stack of 1350-1379
		Stack = -2.2  for stack of 1351-1378
		Stack = -2.1  for stack of 1352-1377
		Stack = -3.3  for stack of 1353-1376
	Helix total = -9.7
	Internal/bulge = 3.0  for closure of 1354-1375	Size = 4
		Stack = -2.5  for stack of 1356-1371
		Stack = -2.1  for stack of 1357-1370
		Stack = -1.0  for stack of 1358-1369
		Stack = -2.1  for stack of 1359-1368
		Stack = -3.4  for stack of 1360-1367
	Helix total = -11.1
	Hairpin = 4.1  for closure of 1361-1366
		Stack = -2.2  for stack of 1290-1329
		Stack = -0.9  for stack of 1291-1328
	Helix total = -3.1
	Internal/bulge = -1.4  for closure of 1292-1327	Size = 2
		Stack = -2.2  for stack of 1294-1325
	Helix total = -2.2
	Multiloop = 8.8  for closure of 1295-1324
		Stack = -1.4  for stack of 1309-1320
		Stack = -3.4  for stack of 1310-1319
	Helix total = -4.8
	Hairpin = 3.3  for closure of 1311-1318
		Stack = -0.5  for stack of 1296-1305
		Stack = -1.3  for stack of 1297-1304
	Helix total = -1.8
	Hairpin = 4.4  for closure of 1298-1303
		Stack = -2.1  for stack of 1221-1264
		Stack = -2.2  for stack of 1222-1263
		Stack = -2.1  for stack of 1223-1262
		Stack = -0.9  for stack of 1224-1261
	Helix total = -7.3
	Internal/bulge = 3.6  for closure of 1225-1260	Size = 14
		Stack = -2.4  for stack of 1234-1253
	Helix total = -2.4
	Internal/bulge = 1.9  for closure of 1235-1252	Size = 2
		Stack = -2.1  for stack of 1237-1250
		Stack = -2.4  for stack of 1238-1249
	Helix total = -4.5
	Hairpin = 5.2  for closure of 1239-1248
		Stack = -0.5  for stack of 1186-1201
		Stack = -0.5  for stack of 1187-1200
		Stack = -1.4  for stack of 1188-1199
	Helix total = -2.4
	Hairpin = 4.4  for closure of 1189-1198
		Stack = -0.5  for stack of 1110-1137
		Stack = -2.1  for stack of 1111-1136
	Helix total = -2.6
	Internal/bulge = 3.4  for closure of 1112-1135	Size = 10
		Stack = -2.1  for stack of 1119-1130
		Stack = -2.5  for stack of 1120-1129
		Stack = -1.5  for stack of 1121-1128
	Helix total = -6.1
	Hairpin = 3.3  for closure of 1122-1127
		Stack = -2.1  for stack of 614-1108
		Stack = -2.1  for stack of 615-1107
	Helix total = -4.2
	Internal/bulge = 4.5  for closure of 616-1106	Size = 5
	Helix total = 0.0
	Multiloop = 5.6  for closure of 622-1105
		Stack = -2.5  for stack of 1033-1104
		Stack = -3.3  for stack of 1034-1103
	Helix total = -5.8
	Internal/bulge = 3.6  for closure of 1035-1102	Size = 4
		Stack = -2.4  for stack of 1036-1097
		Stack = -2.2  for stack of 1037-1096
		Stack = -2.1  for stack of 1038-1095
	Helix total = -6.7
	Multiloop = 4.8  for closure of 1039-1094
		Stack = -2.4  for stack of 1084-1091
	Helix total = -2.4
	Hairpin = 4.4  for closure of 1085-1090
		Stack = -2.1  for stack of 1041-1080
		Stack = -3.3  for stack of 1042-1079
	Helix total = -5.4
	Internal/bulge = 2.6  for closure of 1043-1078	Size = 5
		Stack = -2.4  for stack of 1046-1074
		Stack = -1.5  for stack of 1047-1073
		Stack = -2.1  for stack of 1048-1072
		Stack = -2.2  for stack of 1049-1071
		Stack = -2.1  for stack of 1050-1070
		Stack = -3.3  for stack of 1051-1069
	Helix total = -13.6
	Internal/bulge = 0.5  for closure of 1052-1068	Size = 1 BP stack across bulge = -3.3
		Stack = -2.2  for stack of 1054-1067
		Stack = -1.3  for stack of 1055-1066
	Helix total = -3.5
	Hairpin = 4.6  for closure of 1056-1065
		Stack = -2.2  for stack of 981-1022
		Stack = -0.9  for stack of 982-1021
		Stack = -1.3  for stack of 983-1020
		Stack = -0.6  for stack of 984-1019
		Stack = -2.1  for stack of 985-1018
		Stack = -1.5  for stack of 986-1017
	Helix total = -8.6
	Internal/bulge = 3.7  for closure of 987-1016	Size = 3
	Helix total = 0.0
	Internal/bulge = 0.0  for closure of 991-1015	Size = 6
		Stack = -2.4  for stack of 995-1011
		Stack = -1.4  for stack of 996-1010
		Stack = -1.4  for stack of 997-1009
	Helix total = -5.2
	Hairpin = 4.9  for closure of 998-1008
	Helix total = 0.0
	Internal/bulge = 1.2  for closure of 624-976	Size = 2
		Stack = -2.4  for stack of 626-974
	Helix total = -2.4
	Internal/bulge = 1.7  for closure of 627-973	Size = 6
		Stack = -1.4  for stack of 631-969
		Stack = -0.9  for stack of 632-968
		Stack = -1.0  for stack of 633-967
	Helix total = -3.3
	Multiloop = 9.4  for closure of 634-966
		Stack = -1.5  for stack of 866-963
		Stack = -0.5  for stack of 867-962
		Stack = -1.3  for stack of 868-961
	Helix total = -3.3
	Internal/bulge = 0.8  for closure of 869-960	Size = 1 BP stack across bulge = -2.2
		Stack = -2.4  for stack of 870-958
	Helix total = -2.4
	Internal/bulge = 1.2  for closure of 871-957	Size = 2
		Stack = -1.5  for stack of 873-955
	Helix total = -1.5
	Internal/bulge = 1.0  for closure of 874-954	Size = 5
		Stack = -3.3  for stack of 878-951
		Stack = -3.4  for stack of 879-950
		Stack = -2.1  for stack of 880-949
	Helix total = -8.8
	Multiloop = 7.3  for closure of 881-948
		Stack = -3.4  for stack of 937-944
	Helix total = -3.4
	Hairpin = 3.3  for closure of 938-943
		Stack = -2.1  for stack of 885-929
		Stack = -2.2  for stack of 886-928
	Helix total = -4.3
	Internal/bulge = 1.9  for closure of 887-927	Size = 2
		Stack = -0.9  for stack of 889-925
		Stack = -2.4  for stack of 890-924
		Stack = -2.1  for stack of 891-923
		Stack = -0.9  for stack of 892-922
		Stack = -1.1  for stack of 893-921
	Helix total = -7.4
	Internal/bulge = 1.9  for closure of 894-920	Size = 2
	Helix total = 0.0
	Internal/bulge = 4.3  for closure of 896-918	Size = 9
		Stack = -2.4  for stack of 900-911
		Stack = -0.6  for stack of 901-910
	Helix total = -3.0
	Hairpin = 4.4  for closure of 902-909
		Stack = -1.3  for stack of 698-740
		Stack = -1.5  for stack of 699-739
		Stack = -2.1  for stack of 700-738
		Stack = -2.1  for stack of 701-737
		Stack = -3.3  for stack of 702-736
	Helix total = -10.3
	Internal/bulge = 2.3  for closure of 703-735	Size = 8
		Stack = -3.3  for stack of 708-730
	Helix total = -3.3
	Internal/bulge = -0.4  for closure of 709-729	Size = 4
		Stack = -2.4  for stack of 712-726
		Stack = -2.1  for stack of 713-725
		Stack = -2.5  for stack of 714-724
		Stack = -1.5  for stack of 715-723
	Helix total = -8.5
	Hairpin = 4.9  for closure of 716-722
		Stack = -2.1  for stack of 641-693
		Stack = -3.3  for stack of 642-692
		Stack = -3.4  for stack of 643-691
		Stack = -3.3  for stack of 644-690
		Stack = -3.3  for stack of 645-689
	Helix total = -15.4
	Internal/bulge = -1.4  for closure of 646-688	Size = 2
		Stack = -2.2  for stack of 648-686
		Stack = -0.9  for stack of 649-685
		Stack = -2.1  for stack of 650-684
		Stack = -3.3  for stack of 651-683
	Helix total = -8.5
	Internal/bulge = 3.6  for closure of 652-682	Size = 4
		Stack = -3.3  for stack of 653-677
		Stack = -1.4  for stack of 654-676
		Stack = -2.1  for stack of 655-675
		Stack = -2.2  for stack of 656-674
	Helix total = -9.0
	Internal/bulge = 3.0  for closure of 657-673	Size = 4
		Stack = -2.4  for stack of 659-669
		Stack = -2.4  for stack of 660-668
	Helix total = -4.8
	Hairpin = 4.5  for closure of 661-667
		Stack = -0.6  for stack of 22-603
		Stack = -1.4  for stack of 23-602
	Helix total = -2.0
	Internal/bulge = 2.5  for closure of 24-601	Size = 1 BP stack across bulge = -1.3
		Stack = -1.1  for stack of 26-600
		Stack = -1.3  for stack of 27-599
		Stack = -1.4  for stack of 28-598
		Stack = -1.4  for stack of 29-597
		Stack = -3.4  for stack of 30-596
		Stack = -2.1  for stack of 31-595
	Helix total = -10.7
	Multiloop = 3.6  for closure of 32-594
		Stack = -0.9  for stack of 546-592
		Stack = -2.1  for stack of 547-591
		Stack = -3.3  for stack of 548-590
		Stack = -2.4  for stack of 549-589
		Stack = -2.1  for stack of 550-588
	Helix total = -10.8
	Internal/bulge = 4.6  for closure of 551-587	Size = 7
		Stack = -2.1  for stack of 559-586
		Stack = -2.1  for stack of 560-585
		Stack = -3.3  for stack of 561-584
	Helix total = -7.5
	Hairpin = 5.6  for closure of 562-583
		Stack = -2.2  for stack of 516-536
	Helix total = -2.2
	Hairpin = 6.6  for closure of 517-535
		Stack = -1.4  for stack of 479-509
		Stack = -1.3  for stack of 480-508
	Helix total = -2.7
	Internal/bulge = 2.3  for closure of 481-507	Size = 1 BP stack across bulge = -1.1
		Stack = -1.3  for stack of 482-505
		Stack = -2.2  for stack of 483-504
		Stack = -2.1  for stack of 484-503
		Stack = -0.6  for stack of 485-502
		Stack = -2.1  for stack of 486-501
		Stack = -1.5  for stack of 487-500
		Stack = -2.5  for stack of 488-499
		Stack = -3.3  for stack of 489-498
		Stack = -3.3  for stack of 490-497
	Helix total = -18.9
	Hairpin = 4.1  for closure of 491-496
	Helix total = 0.0
	Internal/bulge = 1.9  for closure of 35-473	Size = 2
	Helix total = 0.0
	Multiloop = 7.2  for closure of 37-471
	Helix total = 0.0
	Internal/bulge = 2.1  for closure of 439-464	Size = 1 BP stack across bulge = -1.3
		Stack = -2.2  for stack of 441-463
		Stack = -3.3  for stack of 442-462
	Helix total = -5.5
	Internal/bulge = 3.0  for closure of 443-461	Size = 4
		Stack = -1.5  for stack of 447-459
		Stack = -3.3  for stack of 448-458
		Stack = -2.1  for stack of 449-457
	Helix total = -6.9
	Hairpin = 5.4  for closure of 450-456
	Helix total = 0.0
	Internal/bulge = 4.4  for closure of 42-433	Size = 6
		Stack = -3.4  for stack of 48-431
		Stack = -3.3  for stack of 49-430
	Helix total = -6.7
	Internal/bulge = 1.7  for closure of 50-429	Size = 1 BP stack across bulge = -2.1
		Stack = -2.1  for stack of 52-428
		Stack = -3.4  for stack of 53-427
	Helix total = -5.5
	Multiloop = 0.1  for closure of 54-426
	Helix total = 0.0
	Internal/bulge = 1.2  for closure of 411-422	Size = 2
		Stack = -2.4  for stack of 413-420
	Helix total = -2.4
	Hairpin = 3.3  for closure of 414-419
		Stack = -3.3  for stack of 388-409
	Helix total = -3.3
	Internal/bulge = 1.2  for closure of 389-408	Size = 2
		Stack = -2.1  for stack of 391-406
		Stack = -3.4  for stack of 392-405
	Helix total = -5.5
	Hairpin = 5.5  for closure of 393-404
		Stack = -2.1  for stack of 97-386
		Stack = -2.4  for stack of 98-385
	Helix total = -4.5
	Multiloop = 2.6  for closure of 99-384
		Stack = -2.4  for stack of 361-383
		Stack = -3.3  for stack of 362-382
		Stack = -1.5  for stack of 363-381
	Helix total = -7.2
	Internal/bulge = 3.7  for closure of 364-380	Size = 3
		Stack = -2.4  for stack of 365-376
		Stack = -0.9  for stack of 366-375
		Stack = -1.4  for stack of 367-374
	Helix total = -4.7
	Hairpin = 5.0  for closure of 368-373
		Stack = -3.3  for stack of 309-357
		Stack = -2.1  for stack of 310-356
	Helix total = -5.4
	Internal/bulge = 5.1  for closure of 311-355	Size = 10
		Stack = -2.2  for stack of 316-348
		Stack = -2.1  for stack of 317-347
	Helix total = -4.3
	Internal/bulge = 4.6  for closure of 318-346	Size = 4
		Stack = -1.1  for stack of 323-345
		Stack = -2.1  for stack of 324-344
		Stack = -3.3  for stack of 325-343
		Stack = -2.2  for stack of 326-342
		Stack = -1.3  for stack of 327-341
		Stack = -2.1  for stack of 328-340
		Stack = -3.3  for stack of 329-339
	Helix total = -15.4
	Hairpin = 4.7  for closure of 330-338
		Stack = -2.1  for stack of 107-307
		Stack = -2.1  for stack of 108-306
	Helix total = -4.2
	Internal/bulge = 0.3  for closure of 109-305	Size = 4
	Helix total = 0.0
	Internal/bulge = 3.7  for closure of 112-302	Size = 4
		Stack = -0.9  for stack of 116-300
	Helix total = -0.9
	Internal/bulge = 3.5  for closure of 117-299	Size = 7
		Stack = -2.1  for stack of 122-295
		Stack = -2.4  for stack of 123-294
	Helix total = -4.5
	Multiloop = 7.5  for closure of 124-293
		Stack = -2.4  for stack of 267-288
		Stack = -2.4  for stack of 268-287
		Stack = -3.4  for stack of 269-286
	Helix total = -8.2
	Internal/bulge = 1.7  for closure of 270-285	Size = 1 BP stack across bulge = -2.1
		Stack = 0.3  for stack of 272-284
		Stack = -2.1  for stack of 273-283
		Stack = -3.4  for stack of 274-282
	Helix total = -5.2
	Hairpin = 4.9  for closure of 275-281
		Stack = -0.9  for stack of 208-257
		Stack = -1.3  for stack of 209-256
		Stack = -1.1  for stack of 210-255
		Stack = -0.9  for stack of 211-254
		Stack = -1.3  for stack of 212-253
	Helix total = -5.5
	Internal/bulge = 3.5  for closure of 213-252	Size = 14
		Stack = -1.1  for stack of 222-245
		Stack = -2.4  for stack of 223-244
		Stack = -2.1  for stack of 224-243
		Stack = -0.9  for stack of 225-242
	Helix total = -6.5
	Internal/bulge = 3.0  for closure of 226-241	Size = 4
		Stack = -2.2  for stack of 228-237
		Stack = -2.4  for stack of 229-236
	Helix total = -4.6
	Hairpin = 3.7  for closure of 230-235
		Stack = -1.1  for stack of 182-203
		Stack = -2.4  for stack of 183-202
		Stack = -2.1  for stack of 184-201
		Stack = -2.4  for stack of 185-200
	Helix total = -8.0
	Internal/bulge = -0.2  for closure of 186-199	Size = 4
		Stack = -3.3  for stack of 189-196
	Helix total = -3.3
	Hairpin = 4.8  for closure of 190-195
		Stack = -2.1  for stack of 139-175
		Stack = -1.1  for stack of 140-174
		Stack = -2.1  for stack of 141-173
	Helix total = -5.3
	Internal/bulge = 1.7  for closure of 142-172	Size = 12
		Stack = -2.1  for stack of 149-165
	Helix total = -2.1
	Internal/bulge = -0.7  for closure of 150-164	Size = 2
		Stack = -1.0  for stack of 152-162
		Stack = -2.1  for stack of 153-161
	Helix total = -3.1
	Hairpin = 4.1  for closure of 154-160
		Stack = -2.5  for stack of 57-90
	Helix total = -2.5
	Internal/bulge = 4.2  for closure of 58-89	Size = 3
		Stack = -2.1  for stack of 62-88
		Stack = -2.2  for stack of 63-87
	Helix total = -4.3
	Hairpin = 6.8  for closure of 64-86
		Stack = -2.1  for stack of 4-20
		Stack = -2.1  for stack of 5-19
		Stack = -3.3  for stack of 6-18
		Stack = -2.5  for stack of 7-17
	Helix total = -10.0
	Hairpin = 5.1  for closure of 8-16


	Total energy = -258.4



