Pseudoknot Energy Details for Structure 1:
	Knotted Pairs:
	    458:479 459:478 460:477
	Energy of Broken Structure: -230.1
	Energy of Pseudo-Helices:   -6.7
	Pseudoknot Energy Penalty:  7.2
	Total Free Energy:          -229.6
Details follow for Broken (Pseudoknot-free) Structure.
Thermodynamic details for structure # 1
	Exterior loop = -4.0
		Stack = -3.3  for stack of 22-509
		Stack = -3.4  for stack of 23-508
		Stack = -3.3  for stack of 24-507
		Stack = -2.4  for stack of 25-506
		Stack = -3.4  for stack of 26-505
		Stack = -2.1  for stack of 27-504
		Stack = 0.3  for stack of 28-503
		Stack = -2.5  for stack of 29-502
		Stack = -2.1  for stack of 30-501
	Helix total = -22.2
	Multiloop = 3.0  for closure of 31-500
		Stack = -3.3  for stack of 452-498
		Stack = -3.3  for stack of 453-497
		Stack = -3.4  for stack of 454-496
		Stack = -3.3  for stack of 455-495
		Stack = -2.4  for stack of 456-494
	Helix total = -15.7
	Internal/bulge = 4.6  for closure of 457-493	Size = 7
		Stack = -3.3  for stack of 465-492
		Stack = -2.4  for stack of 466-491
		Stack = -3.3  for stack of 467-490
		Stack = -2.2  for stack of 468-489
		Stack = -1.0  for stack of 469-488
	Helix total = -12.2
	Hairpin = 6.0  for closure of 470-487
		Stack = -3.3  for stack of 425-443
		Stack = -3.3  for stack of 426-442
		Stack = -2.2  for stack of 427-441
		Stack = -2.1  for stack of 428-440
		Stack = -3.4  for stack of 429-439
	Helix total = -14.3
	Hairpin = 5.0  for closure of 430-438
		Stack = -3.4  for stack of 401-419
		Stack = -2.1  for stack of 402-418
		Stack = -1.5  for stack of 403-417
		Stack = -2.4  for stack of 404-416
		Stack = -3.4  for stack of 405-415
		Stack = -2.4  for stack of 406-414
		Stack = -3.4  for stack of 407-413
	Helix total = -18.6
	Hairpin = 5.4  for closure of 408-412
		Stack = -2.4  for stack of 33-398
		Stack = -3.3  for stack of 34-397
		Stack = -2.4  for stack of 35-396
		Stack = -3.3  for stack of 36-395
		Stack = -3.4  for stack of 37-394
		Stack = -2.1  for stack of 38-393
		Stack = -2.1  for stack of 39-392
		Stack = -1.5  for stack of 40-391
	Helix total = -20.5
	Multiloop = 5.6  for closure of 41-390
		Stack = -3.3  for stack of 361-389
	Helix total = -3.3
	Internal/bulge = 0.5  for closure of 362-388	Size = 1 BP stack across bulge = -3.3
		Stack = -3.3  for stack of 364-387
		Stack = -2.4  for stack of 365-386
	Helix total = -5.7
	Internal/bulge = 3.0  for closure of 366-385	Size = 4
		Stack = -1.4  for stack of 370-383
		Stack = -3.4  for stack of 371-382
		Stack = -2.4  for stack of 372-381
		Stack = -3.3  for stack of 373-380
	Helix total = -10.5
	Hairpin = 3.1  for closure of 374-379
	Helix total = 0.0
	Internal/bulge = 4.4  for closure of 42-356	Size = 6
		Stack = -3.4  for stack of 48-354
		Stack = -3.3  for stack of 49-353
	Helix total = -6.7
	Internal/bulge = 1.7  for closure of 50-352	Size = 1 BP stack across bulge = -2.1
		Stack = -2.1  for stack of 52-351
		Stack = -3.4  for stack of 53-350
	Helix total = -5.5
	Multiloop = 0.5  for closure of 54-349
		Stack = -3.4  for stack of 334-345
		Stack = -3.3  for stack of 335-344
		Stack = -3.3  for stack of 336-343
	Helix total = -10.0
	Hairpin = 2.8  for closure of 337-342
		Stack = -2.1  for stack of 311-332
		Stack = -3.3  for stack of 312-331
		Stack = -2.4  for stack of 313-330
		Stack = -2.2  for stack of 314-329
		Stack = -3.3  for stack of 315-328
	Helix total = -13.3
	Hairpin = 5.5  for closure of 316-327
		Stack = -2.1  for stack of 103-309
		Stack = -2.4  for stack of 104-308
	Helix total = -4.5
	Multiloop = 1.8  for closure of 105-307
		Stack = -2.4  for stack of 284-306
		Stack = -3.3  for stack of 285-305
		Stack = -3.3  for stack of 286-304
	Helix total = -9.0
	Internal/bulge = 3.2  for closure of 287-303	Size = 3
		Stack = -3.3  for stack of 288-299
		Stack = -2.1  for stack of 289-298
		Stack = -1.4  for stack of 290-297
	Helix total = -6.8
	Hairpin = 4.7  for closure of 291-296
		Stack = -2.4  for stack of 235-281
		Stack = -3.3  for stack of 236-280
	Helix total = -5.7
	Internal/bulge = 2.7  for closure of 237-279	Size = 10
		Stack = -3.3  for stack of 242-272
		Stack = -2.5  for stack of 243-271
	Helix total = -5.8
	Internal/bulge = 3.8  for closure of 244-270	Size = 2
		Stack = -0.9  for stack of 247-269
		Stack = -2.1  for stack of 248-268
		Stack = -3.3  for stack of 249-267
		Stack = -2.2  for stack of 250-266
		Stack = -2.1  for stack of 251-265
		Stack = -3.3  for stack of 252-264
		Stack = -3.3  for stack of 253-263
	Helix total = -17.2
	Hairpin = 3.8  for closure of 254-262
		Stack = -2.4  for stack of 113-233
		Stack = -2.5  for stack of 114-232
		Stack = 0.3  for stack of 115-231
		Stack = -2.1  for stack of 116-230
		Stack = -2.4  for stack of 117-229
		Stack = -2.2  for stack of 118-228
	Helix total = -11.3
	Internal/bulge = 2.8  for closure of 119-227	Size = 2
		Stack = -3.3  for stack of 122-226
	Helix total = -3.3
	Internal/bulge = 2.3  for closure of 123-225	Size = 5
		Stack = -3.3  for stack of 127-222
		Stack = -2.1  for stack of 128-221
		Stack = -2.4  for stack of 129-220
		Stack = -2.4  for stack of 130-219
		Stack = -3.3  for stack of 131-218
		Stack = -3.3  for stack of 132-217
	Helix total = -16.8
	Multiloop = 1.0  for closure of 133-216
		Stack = -3.4  for stack of 206-214
	Helix total = -3.4
	Hairpin = 3.4  for closure of 207-213
		Stack = -3.3  for stack of 173-201
		Stack = -1.5  for stack of 174-200
		Stack = -2.1  for stack of 175-199
		Stack = -2.4  for stack of 176-198
		Stack = -1.1  for stack of 177-197
		Stack = -2.1  for stack of 178-196
		Stack = -3.3  for stack of 179-195
		Stack = -3.3  for stack of 180-194
	Helix total = -19.1
	Internal/bulge = 1.4  for closure of 181-193	Size = 1 BP stack across bulge = -2.4
		Stack = -2.2  for stack of 183-192
	Helix total = -2.2
	Hairpin = 3.3  for closure of 184-191
		Stack = -3.3  for stack of 135-169
		Stack = -3.3  for stack of 136-168
		Stack = -3.3  for stack of 137-167
		Stack = -3.3  for stack of 138-166
	Helix total = -13.2
	Internal/bulge = 3.0  for closure of 139-165	Size = 9
		Stack = -3.3  for stack of 144-159
		Stack = -3.3  for stack of 145-158
		Stack = -3.3  for stack of 146-157
		Stack = -1.4  for stack of 147-156
		Stack = -2.1  for stack of 148-155
	Helix total = -13.4
	Hairpin = 3.1  for closure of 149-154
		Stack = -2.5  for stack of 57-96
		Stack = -1.5  for stack of 58-95
	Helix total = -4.0
	Internal/bulge = 2.8  for closure of 59-94	Size = 2
		Stack = -3.3  for stack of 62-93
	Helix total = -3.3
	Internal/bulge = 0.5  for closure of 63-92	Size = 2
		Stack = -3.4  for stack of 65-90
		Stack = -2.1  for stack of 66-89
		Stack = -0.9  for stack of 67-88
		Stack = -2.1  for stack of 68-87
		Stack = -2.5  for stack of 69-86
		Stack = -1.0  for stack of 70-85
		Stack = -1.1  for stack of 71-84
		Stack = -2.4  for stack of 72-83
		Stack = -3.3  for stack of 73-82
		Stack = -3.3  for stack of 74-81
	Helix total = -22.1
	Hairpin = 3.7  for closure of 75-80
		Stack = -2.1  for stack of 4-20
		Stack = -2.1  for stack of 5-19
		Stack = -3.3  for stack of 6-18
		Stack = -2.5  for stack of 7-17
	Helix total = -10.0
	Hairpin = 5.1  for closure of 8-16


	Total energy = -230.1



