Pseudoknot Energy Details for Structure 1:
	Knotted Pairs:
	    56:76 57:75 58:74 60:72 148:181 149:180 150:179 151:178
	    152:177 153:176 198:231 199:230 200:229 201:228 202:227 203:226
	    250:285 251:284 252:283 253:282 254:281 255:280 256:279
	Energy of Broken Structure: -100.7
	Energy of Pseudo-Helices:   -43.4
	Pseudoknot Energy Penalty:  31.8
	Total Free Energy:          -112.3
Details follow for Broken (Pseudoknot-free) Structure.
Thermodynamic details for structure # 1
	Exterior loop = -1.7
		Stack = -3.3  for stack of 1-348
		Stack = -1.5  for stack of 2-347
		Stack = -2.1  for stack of 3-346
		Stack = -3.3  for stack of 4-345
		Stack = -3.4  for stack of 5-344
		Stack = -2.4  for stack of 6-343
	Helix total = -16.0
	Multiloop = 5.1  for closure of 7-342
		Stack = -3.3  for stack of 325-341
		Stack = -3.3  for stack of 326-340
		Stack = -3.3  for stack of 327-339
		Stack = -3.3  for stack of 328-338
	Helix total = -13.2
	Hairpin = 4.4  for closure of 329-337
		Stack = -2.4  for stack of 20-321
		Stack = -1.5  for stack of 21-320
		Stack = -0.5  for stack of 22-319
		Stack = -1.3  for stack of 23-318
	Helix total = -5.7
	Internal/bulge = 0.1  for closure of 24-317	Size = 4
	Helix total = 0.0
	Internal/bulge = 1.9  for closure of 27-314	Size = 3
		Stack = -1.5  for stack of 30-312
		Stack = -2.4  for stack of 31-311
		Stack = -2.2  for stack of 32-310
		Stack = -1.0  for stack of 33-309
	Helix total = -7.1
	Internal/bulge = -0.7  for closure of 34-308	Size = 2
		Stack = -2.1  for stack of 36-306
		Stack = -3.3  for stack of 37-305
		Stack = -1.5  for stack of 38-304
		Stack = -2.1  for stack of 39-303
		Stack = -2.4  for stack of 40-302
		Stack = -2.1  for stack of 41-301
		Stack = -1.5  for stack of 42-300
	Helix total = -15.0
	Internal/bulge = 4.1  for closure of 43-299	Size = 4
		Stack = -2.4  for stack of 44-294
		Stack = -2.2  for stack of 45-293
		Stack = -2.1  for stack of 46-292
		Stack = -3.4  for stack of 47-291
	Helix total = -10.1
	Multiloop = 2.3  for closure of 48-290
		Stack = -3.4  for stack of 234-268
	Helix total = -3.4
	Internal/bulge = 0.5  for closure of 235-267	Size = 2
		Stack = -3.4  for stack of 237-265
		Stack = -3.3  for stack of 238-264
		Stack = -2.1  for stack of 239-263
		Stack = -2.2  for stack of 240-262
		Stack = -3.3  for stack of 241-261
	Helix total = -14.3
	Internal/bulge = 2.8  for closure of 242-260	Size = 2
		Stack = -3.3  for stack of 245-259
		Stack = -2.1  for stack of 246-258
	Helix total = -5.4
	Hairpin = 6.3  for closure of 247-257
	Helix total = 0.0
	Internal/bulge = 1.9  for closure of 183-217	Size = 2
		Stack = -2.1  for stack of 185-215
		Stack = -3.4  for stack of 186-214
		Stack = -3.3  for stack of 187-213
	Helix total = -8.8
	Internal/bulge = 1.7  for closure of 188-212	Size = 6
		Stack = -2.1  for stack of 192-208
		Stack = -3.4  for stack of 193-207
		Stack = -2.1  for stack of 194-206
		Stack = -1.3  for stack of 195-205
	Helix total = -8.9
	Hairpin = 5.8  for closure of 196-204
		Stack = -2.4  for stack of 132-169
		Stack = -2.2  for stack of 133-168
		Stack = -0.9  for stack of 134-167
		Stack = -2.4  for stack of 135-166
	Helix total = -7.9
	Internal/bulge = 2.9  for closure of 136-165	Size = 6
		Stack = -2.5  for stack of 139-160
		Stack = -3.3  for stack of 140-159
		Stack = -2.1  for stack of 141-158
		Stack = -2.2  for stack of 142-157
		Stack = -2.1  for stack of 143-156
		Stack = -1.4  for stack of 144-155
	Helix total = -13.6
	Hairpin = 4.2  for closure of 145-154
		Stack = -3.4  for stack of 110-131
		Stack = -2.1  for stack of 111-130
		Stack = -1.0  for stack of 112-129
		Stack = -2.5  for stack of 113-128
		Stack = -2.1  for stack of 114-127
		Stack = -0.9  for stack of 115-126
		Stack = -1.3  for stack of 116-125
		Stack = -0.9  for stack of 117-124
	Helix total = -14.2
	Hairpin = 5.5  for closure of 118-123
		Stack = -2.4  for stack of 49-65
		Stack = -3.3  for stack of 50-64
		Stack = -3.3  for stack of 51-63
	Helix total = -9.0
	Hairpin = 4.8  for closure of 52-62


	Total energy = -100.7



