Pseudoknot Energy Details for Structure 1:
	Knotted Pairs:
	    49:67 50:66 51:65 52:64 53:63 177:218 178:217 179:216
	    180:215 181:214 182:213 234:265 235:264 236:263 237:262 238:261
	    283:320 284:319 285:318 286:317 287:315 288:314 289:313
	Energy of Broken Structure: -64.2
	Energy of Pseudo-Helices:   -43.5
	Pseudoknot Energy Penalty:  33.5
	Total Free Energy:          -74.2
Details follow for Broken (Pseudoknot-free) Structure.
Thermodynamic details for structure # 1
	Exterior loop = -1.7
		Stack = -3.3  for stack of 1-380
		Stack = -1.5  for stack of 2-379
		Stack = -2.1  for stack of 3-378
		Stack = -3.4  for stack of 4-377
		Stack = -2.1  for stack of 5-376
		Stack = -2.1  for stack of 6-375
	Helix total = -14.5
	Multiloop = 5.2  for closure of 7-374
		Stack = -3.4  for stack of 357-373
		Stack = -2.4  for stack of 358-372
		Stack = -3.3  for stack of 359-371
		Stack = -3.3  for stack of 360-370
	Helix total = -12.4
	Hairpin = 4.4  for closure of 361-369
		Stack = -2.4  for stack of 21-353
		Stack = -3.3  for stack of 22-352
		Stack = -1.5  for stack of 23-351
		Stack = -1.3  for stack of 24-350
		Stack = -1.1  for stack of 25-349
		Stack = -0.9  for stack of 26-348
		Stack = -0.9  for stack of 27-347
	Helix total = -11.4
	Internal/bulge = 2.9  for closure of 28-346	Size = 11
		Stack = -3.3  for stack of 35-340
		Stack = -2.1  for stack of 36-339
	Helix total = -5.4
	Internal/bulge = 1.0  for closure of 37-338	Size = 4
		Stack = -3.3  for stack of 40-335
		Stack = -2.5  for stack of 41-334
		Stack = 0.3  for stack of 42-333
	Helix total = -5.5
	Internal/bulge = 3.7  for closure of 43-332	Size = 3
		Stack = -2.1  for stack of 44-328
		Stack = -1.1  for stack of 45-327
		Stack = -2.1  for stack of 46-326
		Stack = -3.4  for stack of 47-325
	Helix total = -8.7
	Multiloop = 6.7  for closure of 48-324
		Stack = 1.3  for stack of 268-303
		Stack = -0.5  for stack of 269-302
		Stack = -0.6  for stack of 270-301
		Stack = -2.1  for stack of 271-300
		Stack = -2.2  for stack of 272-299
		Stack = -1.3  for stack of 273-298
		Stack = -1.0  for stack of 274-297
		Stack = -2.1  for stack of 275-296
		Stack = -2.5  for stack of 276-295
	Helix total = -11.0
	Internal/bulge = 1.2  for closure of 277-294	Size = 2
		Stack = -3.4  for stack of 279-292
		Stack = -2.4  for stack of 280-291
	Helix total = -5.8
	Hairpin = 4.5  for closure of 281-290
		Stack = -2.4  for stack of 222-249
		Stack = -2.5  for stack of 223-248
	Helix total = -4.9
	Internal/bulge = 1.4  for closure of 224-247	Size = 8
		Stack = -2.5  for stack of 229-242
		Stack = -1.5  for stack of 230-241
		Stack = -3.3  for stack of 231-240
	Helix total = -7.3
	Hairpin = 4.4  for closure of 232-239
		Stack = -3.3  for stack of 159-202
		Stack = -2.1  for stack of 160-201
		Stack = -2.4  for stack of 161-200
		Stack = -2.1  for stack of 162-199
		Stack = -2.4  for stack of 163-198
		Stack = -2.1  for stack of 164-197
	Helix total = -14.4
	Internal/bulge = 4.1  for closure of 165-196	Size = 4
		Stack = -3.3  for stack of 166-191
		Stack = -3.3  for stack of 167-190
		Stack = -2.1  for stack of 168-189
	Helix total = -8.7
	Internal/bulge = 0.7  for closure of 169-188	Size = 4
		Stack = -3.3  for stack of 172-185
		Stack = -2.1  for stack of 173-184
	Helix total = -5.4
	Hairpin = 5.5  for closure of 174-183
	Helix total = 0.0
	Internal/bulge = 1.2  for closure of 115-156	Size = 2
	Helix total = 0.0
	Internal/bulge = 1.3  for closure of 117-154	Size = 4
		Stack = 0.3  for stack of 120-151
	Helix total = 0.3
	Internal/bulge = 2.9  for closure of 121-150	Size = 4
		Stack = -0.9  for stack of 124-147
		Stack = -1.3  for stack of 125-146
	Helix total = -2.2
	Internal/bulge = 1.5  for closure of 126-145	Size = 4
		Stack = -0.6  for stack of 129-142
	Helix total = -0.6
	Hairpin = 6.3  for closure of 130-141
		Stack = -2.1  for stack of 54-79
		Stack = -2.4  for stack of 55-78
		Stack = -2.1  for stack of 56-77
		Stack = -3.3  for stack of 57-76
	Helix total = -9.9
	Internal/bulge = 1.2  for closure of 58-75	Size = 2
	Helix total = 0.0
	Hairpin = 5.2  for closure of 60-73


	Total energy = -64.2



