Pseudoknot Energy Details for Structure 1:
	Knotted Pairs:
	    14:395 15:394 16:393 18:391 19:390 20:389 92:280 93:279
	    94:278 95:277 96:276 97:275 98:274
	Energy of Broken Structure: -125.0
	Energy of Pseudo-Helices:   -19.4
	Pseudoknot Energy Penalty:  22.0
	Total Free Energy:          -122.4
Details follow for Broken (Pseudoknot-free) Structure.
Thermodynamic details for structure # 1
	Exterior loop = -1.2
		Stack = -2.4  for stack of 1-449
		Stack = -0.9  for stack of 2-448
		Stack = -0.9  for stack of 3-447
		Stack = -2.1  for stack of 4-446
		Stack = -2.4  for stack of 5-445
		Stack = -2.1  for stack of 6-444
		Stack = -2.2  for stack of 7-443
		Stack = -1.3  for stack of 8-442
		Stack = -0.9  for stack of 9-441
		Stack = -2.1  for stack of 10-440
	Helix total = -17.3
	Internal/bulge = 0.4  for closure of 11-439	Size = 1 BP stack across bulge = -3.4
		Stack = -1.4  for stack of 12-437
	Helix total = -1.4
	Multiloop = 6.3  for closure of 13-436
		Stack = -0.9  for stack of 76-434
		Stack = -2.1  for stack of 77-433
	Helix total = -3.0
	Internal/bulge = 0.4  for closure of 78-432	Size = 1 BP stack across bulge = -3.4
		Stack = -3.3  for stack of 80-431
		Stack = -2.4  for stack of 81-430
		Stack = -3.3  for stack of 82-429
		Stack = -3.3  for stack of 83-428
	Helix total = -12.3
	Multiloop = 2.0  for closure of 84-427
		Stack = -3.3  for stack of 397-417
		Stack = -3.3  for stack of 398-416
	Helix total = -6.6
	Internal/bulge = 1.4  for closure of 399-415	Size = 1 BP stack across bulge = -2.4
		Stack = -2.1  for stack of 401-414
		Stack = -2.2  for stack of 402-413
		Stack = -0.9  for stack of 403-412
		Stack = -2.1  for stack of 404-411
	Helix total = -7.3
	Hairpin = 4.0  for closure of 405-410
		Stack = -1.5  for stack of 359-378
		Stack = -1.4  for stack of 360-377
		Stack = -1.3  for stack of 361-376
		Stack = -1.1  for stack of 362-375
		Stack = -0.9  for stack of 363-374
		Stack = -0.9  for stack of 364-373
		Stack = -2.1  for stack of 365-372
	Helix total = -9.2
	Hairpin = 3.1  for closure of 366-371
		Stack = -3.3  for stack of 252-352
		Stack = -3.4  for stack of 253-351
	Helix total = -6.7
	Multiloop = 4.4  for closure of 254-350
		Stack = -2.2  for stack of 300-345
		Stack = -2.1  for stack of 301-344
		Stack = -0.9  for stack of 302-343
		Stack = -1.3  for stack of 303-342
		Stack = -0.9  for stack of 304-341
		Stack = -2.2  for stack of 305-340
		Stack = -2.1  for stack of 306-339
		Stack = -1.0  for stack of 307-338
		Stack = -2.5  for stack of 308-337
		Stack = -2.4  for stack of 309-336
		Stack = -2.5  for stack of 310-335
		Stack = -0.6  for stack of 311-334
		Stack = -0.9  for stack of 312-333
	Helix total = -21.6
	Internal/bulge = 1.8  for closure of 313-332	Size = 4
		Stack = 0.3  for stack of 316-329
		Stack = -2.5  for stack of 317-328
		Stack = -2.4  for stack of 318-327
		Stack = -3.4  for stack of 319-326
	Helix total = -8.0
	Hairpin = 3.3  for closure of 320-325
		Stack = -3.3  for stack of 259-296
		Stack = -2.4  for stack of 260-295
		Stack = -0.9  for stack of 261-294
		Stack = -0.9  for stack of 262-293
		Stack = -1.1  for stack of 263-292
		Stack = -1.3  for stack of 264-291
		Stack = -0.9  for stack of 265-290
		Stack = -2.1  for stack of 266-289
	Helix total = -12.9
	Internal/bulge = 0.5  for closure of 267-288	Size = 1 BP stack across bulge = -3.3
		Stack = -2.2  for stack of 269-287
		Stack = -1.3  for stack of 270-286
	Helix total = -3.5
	Hairpin = 5.9  for closure of 271-285
		Stack = -2.1  for stack of 85-248
		Stack = -0.9  for stack of 86-247
		Stack = -2.4  for stack of 87-246
		Stack = -3.3  for stack of 88-245
	Helix total = -8.7
	Internal/bulge = 4.9  for closure of 89-244	Size = 10
		Stack = -1.5  for stack of 100-243
		Stack = -2.5  for stack of 101-242
		Stack = -2.1  for stack of 102-241
		Stack = -2.1  for stack of 103-240
	Helix total = -8.2
	Multiloop = 1.9  for closure of 104-239
		Stack = -3.3  for stack of 135-238
	Helix total = -3.3
	Internal/bulge = 3.2  for closure of 136-237	Size = 3
		Stack = -2.2  for stack of 140-236
	Helix total = -2.2
	Multiloop = 4.9  for closure of 141-235
		Stack = -2.1  for stack of 208-225
		Stack = -2.1  for stack of 209-224
		Stack = -1.5  for stack of 210-223
		Stack = -2.1  for stack of 211-222
		Stack = -2.5  for stack of 212-221
		Stack = -1.5  for stack of 213-220
	Helix total = -11.8
	Hairpin = 3.3  for closure of 214-219
		Stack = -3.3  for stack of 187-205
		Stack = -2.2  for stack of 188-204
		Stack = -2.1  for stack of 189-203
		Stack = -2.5  for stack of 190-202
		Stack = -1.4  for stack of 191-201
	Helix total = -11.5
	Hairpin = 4.9  for closure of 192-200
		Stack = -3.3  for stack of 156-179
	Helix total = -3.3
	Internal/bulge = 3.3  for closure of 157-178	Size = 2
		Stack = -2.5  for stack of 158-175
		Stack = -3.3  for stack of 159-174
		Stack = -2.1  for stack of 160-173
		Stack = -1.3  for stack of 161-172
		Stack = -0.9  for stack of 162-171
		Stack = -2.2  for stack of 163-170
	Helix total = -12.3
	Hairpin = 3.7  for closure of 164-169
	Helix total = 0.0
	Internal/bulge = 2.8  for closure of 120-134	Size = 1 BP stack across bulge = -1.0
		Stack = -2.5  for stack of 121-132
		Stack = -2.4  for stack of 122-131
		Stack = -2.4  for stack of 123-130
	Helix total = -7.3
	Hairpin = 4.4  for closure of 124-129
		Stack = -2.1  for stack of 105-119
		Stack = -2.1  for stack of 106-118
		Stack = -3.3  for stack of 107-117
	Helix total = -7.5
	Hairpin = 4.5  for closure of 108-116
		Stack = -1.4  for stack of 22-71
		Stack = -1.3  for stack of 23-70
		Stack = -0.9  for stack of 24-69
		Stack = -0.9  for stack of 25-68
		Stack = -1.1  for stack of 26-67
		Stack = -1.3  for stack of 27-66
	Helix total = -6.9
	Internal/bulge = 1.2  for closure of 28-65	Size = 2
		Stack = -2.2  for stack of 30-63
	Helix total = -2.2
	Internal/bulge = 1.4  for closure of 31-62	Size = 1 BP stack across bulge = -2.4
		Stack = -2.1  for stack of 32-60
		Stack = -0.9  for stack of 33-59
		Stack = -1.3  for stack of 34-58
		Stack = -0.9  for stack of 35-57
		Stack = -0.9  for stack of 36-56
		Stack = -2.1  for stack of 37-55
		Stack = -2.5  for stack of 38-54
		Stack = -1.0  for stack of 39-53
	Helix total = -11.7
	Internal/bulge = 2.9  for closure of 40-52	Size = 1 BP stack across bulge = -0.9
		Stack = -0.9  for stack of 42-51
		Stack = -1.1  for stack of 43-50
	Helix total = -2.0
	Hairpin = 4.1  for closure of 44-49


	Total energy = -125.0



