Pseudoknot Energy Details for Structure 1:
	Knotted Pairs:
	    48:66 49:65 50:64 151:189 152:188 153:187 154:186 155:185
	    190:223 192:221 199:214 251:288 252:287 253:286 254:285 256:283
	    257:282
	Energy of Broken Structure: -94.1
	Energy of Pseudo-Helices:   -23.8
	Pseudoknot Energy Penalty:  31.7
	Total Free Energy:          -86.2
Details follow for Broken (Pseudoknot-free) Structure.
Thermodynamic details for structure # 1
	Exterior loop = -1.7
		Stack = -3.3  for stack of 1-349
		Stack = -1.5  for stack of 2-348
		Stack = -2.1  for stack of 3-347
		Stack = -3.3  for stack of 4-346
		Stack = -3.4  for stack of 5-345
		Stack = -2.4  for stack of 6-344
	Helix total = -16.0
	Multiloop = 5.1  for closure of 7-343
		Stack = -3.4  for stack of 326-342
		Stack = -2.4  for stack of 327-341
		Stack = -3.3  for stack of 328-340
		Stack = -3.3  for stack of 329-339
	Helix total = -12.4
	Hairpin = 4.4  for closure of 330-338
		Stack = -2.4  for stack of 20-322
		Stack = -1.5  for stack of 21-321
		Stack = -2.5  for stack of 22-320
		Stack = -2.4  for stack of 23-319
		Stack = -2.4  for stack of 24-318
		Stack = -2.1  for stack of 25-317
		Stack = -2.5  for stack of 26-316
		Stack = -1.5  for stack of 27-315
		Stack = -2.4  for stack of 28-314
	Helix total = -19.7
	Internal/bulge = 0.4  for closure of 29-313	Size = 4
		Stack = -2.5  for stack of 32-310
		Stack = -3.3  for stack of 33-309
		Stack = -2.1  for stack of 34-308
		Stack = -0.9  for stack of 35-307
	Helix total = -8.8
	Internal/bulge = 0.0  for closure of 36-306	Size = 4
		Stack = -3.4  for stack of 39-303
	Helix total = -3.4
	Internal/bulge = 3.9  for closure of 40-302	Size = 7
		Stack = -2.1  for stack of 43-296
		Stack = -2.1  for stack of 44-295
		Stack = -3.3  for stack of 45-294
		Stack = -3.4  for stack of 46-293
	Helix total = -10.9
	Multiloop = 0.2  for closure of 47-292
		Stack = -1.5  for stack of 237-270
		Stack = -2.5  for stack of 238-269
		Stack = -2.1  for stack of 239-268
		Stack = -2.1  for stack of 240-267
	Helix total = -8.2
	Internal/bulge = 3.6  for closure of 241-266	Size = 12
	Helix total = 0.0
	Hairpin = 5.6  for closure of 247-258
		Stack = -2.1  for stack of 201-235
		Stack = -3.4  for stack of 202-234
		Stack = -2.1  for stack of 203-233
		Stack = -2.2  for stack of 204-232
		Stack = -3.3  for stack of 205-231
		Stack = -2.1  for stack of 206-230
	Helix total = -15.2
	Hairpin = 6.2  for closure of 207-229
		Stack = -2.4  for stack of 135-172
		Stack = -3.4  for stack of 136-171
		Stack = -2.1  for stack of 137-170
		Stack = -2.4  for stack of 138-169
		Stack = -2.1  for stack of 139-168
	Helix total = -12.4
	Internal/bulge = 3.0  for closure of 140-167	Size = 3
		Stack = -2.1  for stack of 142-164
		Stack = -0.9  for stack of 143-163
		Stack = -0.9  for stack of 144-162
		Stack = -2.2  for stack of 145-161
		Stack = -2.1  for stack of 146-160
	Helix total = -8.2
	Internal/bulge = 1.9  for closure of 147-159	Size = 2
	Helix total = 0.0
	Hairpin = 4.8  for closure of 149-157
		Stack = -3.4  for stack of 116-134
		Stack = -2.1  for stack of 117-133
		Stack = -2.1  for stack of 118-132
		Stack = -3.4  for stack of 119-131
		Stack = -2.1  for stack of 120-130
		Stack = -0.9  for stack of 121-129
		Stack = -1.3  for stack of 122-128
	Helix total = -15.3
	Hairpin = 5.9  for closure of 123-127
		Stack = -3.4  for stack of 55-79
		Stack = -2.1  for stack of 56-78
		Stack = -1.0  for stack of 57-77
		Stack = -2.5  for stack of 58-76
		Stack = -3.3  for stack of 59-75
	Helix total = -12.3
	Hairpin = 5.4  for closure of 60-74


	Total energy = -94.1



