| ## RNAstructure Command Line Help ct2dot | ### Contents ### Index
ct2dot is used to generate a dot bracket file from a single structure within a CT file. The CT structure can be regenerated from the dot bracket structure by using the dot2ct interface. ### USAGE: ct2dot <ct file> <structure number> <bracket file> ### Required parameters:
<ct file> | The name of a CT file containing the structure to convert.
<structure number> | The number, one-indexed, of the structure to convert in the CT file.
<bracket file> | The name of a dot bracket file to which output will be written.
### Options that do not require added values:
-h, -H, --help | Display the usage details message.
### Options that require added values: #### NONE ### References: Reuter, J.S. and Mathews, D.H. "RNAstructure: software for RNA secondary structure prediction and analysis." BMC Bioinformatics, 11:129. (2010).