All Classes
AboutWindow
AnnotationMenu
AppLog
AppMainFrame
ASTAction
ASTAssignment
ASTGuiReference
ASTGuiSearchCriteria
ASTLiteral
ASTNamedArgument
ASTRoot
ASTVarRef
BorderBuilder
BorderedButtonPanel
CharConstants
CharType
ClassLoaderInfo
ClassMatcher
ClassMatcher.MultiClassMatcher
ClassMatcher.SingleClassMatcher
CommandLineParser
CommandLineParser.Argument
CommandLineParser.FlagArg
CommandLineParser.FlagDef
CommandLineParser.ParamAffinity
CommandLineParser.ParseResults
CommandLineParser.UnnamedArg
ComposableBase
ComposableBase.BinaryMatcher
ComposableBase.BinaryMatcher.And
ComposableBase.BinaryMatcher.Or
ComposableBase.BinaryMatcher.Xor
ComposableBase.Identity
ComposableBase.Inverse
ComposableMatcher
ConsoleTools
ConsoleTools.FixedStream
Constants
ConstraintsMenu
Convert
ConverterFilter
DateHelper
DescriptionMatcher
DesignWindow
Dialogs
Displayable
DotPlotBackend
DotPlotBackendProxyJNI
DotsMenu
DrawingWindow
DynalignFoldWindow
DynalignRefoldWindow
DynamicMenuBar
Efn2Window
ExtendedBufferedReader
ExtensibleException
FieldPanel
FieldPanel.FilePanel
FileField
FileFilters
FileMenu
FileSelectButton
FileSelectButton.ExtensionFileFilter
FileSelectButton.FileMenuItem
FileSelectedEvent
Filter
FoldDoubleWindow
FoldSingleWindow
FoldSuboptimalWindow
GuiAppManager
GuiFinder
GuiItemNotFoundException
GuiItemRef
GuiItemRef.ComponentMatcher
GuiRelative
GuiRobot
GuiRobot.ModifierKey
GuiTestScriptParser
GuiTestScriptParser.JJCalls
GuiTestScriptParser.LookaheadSuccess
GuiTestScriptParserConstants
GuiTestScriptParserTokenManager
GuiTestScriptParserTreeConstants
HelpMenu
HTMLCheckBox
ImageDialog
ImageGrabber
InternalWindow
JavaCharStream
JJTGuiTestScriptParserState
KeyAlreadyExistsException
MagicConstant
MaxExpectWindow
ModuleWindow
ModuleWindow.ProgressPanel
MRUFileStorage
MultilignWindow
MultiWindow
Node
NotNull
NucleicAcidMenu
Nullable
NullPrintStream
NullPrintStream.NullByteArrayOutputStream
NumberField
NumberField.DoubleField
NumberField.FloatField
NumberField.IntegerField
ObjTools
OligoScreenWindow
OligoWalkWindow
OSInfo
OSInfo.OSType
Pair
ParseException
ParseFormatException
PartitionDoubleWindow
PartitionSingleWindow
PathTools
PathTools.PathParts
PlotDialog
PlotMenu
PlotRunner
ProbKnotWindow
PseudoknotWindow
RadioButtonPanel
RefoldWindow
RequestFocusListener
ResourceLoader
Resources
RNAstructure
RNAstructureBackendCalculator
RNAstructureBackendCalculatorProxyJNI
RNAstructureMenu
RolloverMenu
RunFunc
RunnerTemplate
RuntimeTools
RuntimeTools.ActionArgumentException
RuntimeTools.ActionException
RuntimeTools.UnsupportedActionException
ScreenCapture
Script
ScriptActions
ScriptNode
ScriptNodePropConstants
ScriptRunner
ScriptRuntime
ScriptRuntimeException
ScrollerPane
SequenceDisplayWindow
SimpleNode
StandardFileChooser
Startup
Startup.AppOptions
Startup.ScriptSource
StochasticWindow
StopWatch
StringBuilderEx
StructureBackend
StructureBackendProxyJNI
StructureDialog
StructureMenu
StructureRunner
SwingClassMatchers
SyntaxErrorException
ToFriendlyString
Token
TokenMgrError
TurboFoldWindow
UserOptions
ValueSelectionDialog
Verbosity
VisibilityMatcher