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These are the Javadocs for all Java folders in the RNAstructure software package.

See: Description

Packages 
Package Description
ur_rna.GUITester  
ur_rna.GUITester.GuiTools  
ur_rna.GUITester.GuiTools.Matchers  
ur_rna.GUITester.ScriptParser  
ur_rna.RNAstructureUI
A package that holds all Java RNAstructure interface classes that are directly called at the Java interface startup.
ur_rna.RNAstructureUI.drawing.dialogs
A package that holds all Java drawing dialogs.
ur_rna.RNAstructureUI.drawing.menus
A package that holds all menus used in the drawing framework.
ur_rna.RNAstructureUI.drawing.proxy
A package that holds all Java drawing classes generated by SWIG that connect the C++ back end to the Java front end.
ur_rna.RNAstructureUI.drawing.runners
A package that holds the run templates that are used when the Java drawing framework is wrapped into self-contained executables.
ur_rna.RNAstructureUI.menus
A package that holds all menus used in the Java RNAstructure interface.
ur_rna.RNAstructureUI.utilities
A package that holds a variety of utilities classes.
ur_rna.RNAstructureUI.windows
A package that holds all internal windows used in the drawing framework.
ur_rna.Utilities  
ur_rna.Utilities.annotation  
These are the Javadocs for all Java folders in the RNAstructure software package.
These folders encompass the Java drawing framework, the Java RNAstructure interface, and the Java utilities classes.

Some classes and packages are backed by C++ files; these C++ files are documented with Doxygen documentation.
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