RNAstructure oligoscreen Results
(Predict stability of hybridization and self-structure for a list of oligonucleotides.)

Sequence	DGbimolecular	DGunimolecular	DGduplex	DG2BPat5'	DG2BPat3'
CCTATCAAGCCTCCTACTAT	-2.8	0.0	-25.5	3.1	1.5
ACCTATCAAGCCTCCTACTA	-2.8	0.0	-25.7	3.2	1.9
AACCTATCAAGCCTCCTACT	-2.8	0.0	-25.3	2.4	2.7
AAACCTATCAAGCCTCCTAC	-2.8	0.0	-23.7	2.0	2.0
TAAACCTATCAAGCCTCCTA	-2.8	0.0	-23.2	1.6	1.9
TTAAACCTATCAAGCCTCCT	-2.8	0.0	-23.6	1.6	3.1
TGGGAGGAGGGTCTGAAACG	-3.0	0.0	-23.9	3.3	3.6
CTGGGAGGAGGGTCTGAAAC	-2.8	0.0	-24.0	2.8	2.4
GCTGGGAGGAGGGTCTGAAA	-2.8	0.0	-25.6	3.5	2.0
TGCTGGGAGGAGGGTCTGAA	-3.0	0.0	-26.3	3.7	2.3
TTGCTGGGAGGAGGGTCTGA	-3.0	0.0	-27.1	2.5	2.8
TCGATTCCTTCGGGCCTGTC	-9.6	-1.2	-29.2	3.5	2.7
TTCGATTCCTTCGGGCCTGT	-9.6	-1.2	-28.9	2.3	2.9
CTTCGATTCCTTCGGGCCTG	-9.6	-1.2	-28.6	2.3	2.8
TCTTCGATTCCTTCGGGCCT	-9.6	-1.2	-29.0	2.6	3.1
TTCTTCGATTCCTTCGGGCC	-9.6	-1.2	-28.2	2.3	4.0
CTTCTTCGATTCCTTCGGGC	-8.6	-1.2	-27.1	2.3	4.0
TCTTCTTCGATTCCTTCGGG	-5.4	-1.2	-25.7	2.6	3.6
TTCTTCTTCGATTCCTTCGG	-4.6	-1.2	-24.6	2.3	4.0
CTTCTTCTTCGATTCCTTCG	-4.6	-1.0	-24.3	2.3	3.5
CCTTCTTCTTCGATTCCTTC	-4.6	0.0	-25.5	3.1	2.3
ACCTTCTTCTTCGATTCCTT	-4.6	0.0	-25.3	3.2	2.3
CACCTTCTTCTTCGATTCCT	-4.6	0.0	-25.9	2.9	3.1
CCACCTTCTTCTTCGATTCC	-4.6	0.0	-27.0	3.3	3.1
TCCACCTTCTTCTTCGATTC	-4.6	0.0	-25.4	3.1	2.3

Download this file: oligoscreen.txt

Command Line:
oligoscreen oligo.txt oligoscreen.txt --DNA --temperature 310.15

RNAstructure

Web Servers for RNA Secondary Structure Prediction

RNAstructure oligoscreen Results(Predict stability of hybridization and self-structure for a list of oligonucleotides.)

RNAstructure oligoscreen Results
(Predict stability of hybridization and self-structure for a list of oligonucleotides.)