RNAstructure multilign Results
(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)

Alignment:

multilign1.fasta gcuguugauggguguucgggguggcgcuggcggcgggaggagcucccucgagccccugcgccugccgccc
multilign2.fasta ggggaaggguuauaggcacaccuagaaugugaaggucgugagccagaggcacccaagagcagacucu---
multilign3.fasta auggugacgugacuuuucuuccucuuacaugcugaaucacugguggaaauucuagaauaag---------

Download alignment file multilign.ali

Structures derived from sequence 1:

Structures derived from sequence 2:

Structures derived from sequence 3:

Command Line:
multilign-smp multilign.config

RNAstructure

Web Servers for RNA Secondary Structure Prediction

RNAstructure multilign Results(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)

Alignment:

Download alignment file multilign.ali

Structures derived from sequence 1:

Structures derived from sequence 2:

Structures derived from sequence 3:

RNAstructure multilign Results
(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)