Thermodynamic details for structure # 1 Exterior loop = -6.0 Stack = -1.4 for stack of 336-1000 Stack = -2.8 for stack of 337-999 Stack = -3.1 for stack of 338-998 Helix total = -7.3 Internal/bulge = 2.4 for closure of 339-997 Size = 4 Stack = -1.7 for stack of 342-994 Stack = -3.2 for stack of 343-993 Stack = -2.7 for stack of 344-992 Stack = -1.3 for stack of 345-991 Helix total = -8.9 Internal/bulge = -0.1 for closure of 346-990 Size = 2 Stack = -3.0 for stack of 348-988 Helix total = -3.0 Internal/bulge = 0.7 for closure of 349-987 Size = 2 Stack = -1.8 for stack of 351-985 Helix total = -1.8 Internal/bulge = 4.9 for closure of 352-984 Size = 3 Stack = -2.7 for stack of 356-983 Stack = -4.0 for stack of 357-982 Helix total = -6.7 Internal/bulge = -1.3 for closure of 358-981 Size = 1 BP stack across bulge = -4.2 Stack = -4.0 for stack of 359-979 Stack = -2.7 for stack of 360-978 Helix total = -6.7 Multiloop = -8.4 for closure of 361-977 Stack = -3.1 for stack of 961-970 Helix total = -3.1 Hairpin = 1.7 for closure of 962-969 Stack = -2.7 for stack of 950-959 Helix total = -2.7 Hairpin = 3.2 for closure of 951-958 Helix total = 0.0 Hairpin = 2.5 for closure of 939-947 Stack = -2.7 for stack of 921-936 Stack = -1.3 for stack of 922-935 Stack = -3.1 for stack of 923-934 Stack = -2.7 for stack of 924-933 Stack = -3.1 for stack of 925-932 Helix total = -12.9 Hairpin = 4.2 for closure of 926-931 Stack = -2.7 for stack of 438-919 Stack = -1.7 for stack of 439-918 Stack = -1.3 for stack of 440-917 Stack = -1.8 for stack of 441-916 Stack = -1.3 for stack of 442-915 Helix total = -8.8 Multiloop = -3.1 for closure of 443-914 Helix total = 0.0 Internal/bulge = 0.2 for closure of 898-912 Size = 1 BP stack across bulge = -2.9 Stack = -3.1 for stack of 899-910 Helix total = -3.1 Hairpin = 3.1 for closure of 900-909 Stack = -3.1 for stack of 882-893 Stack = -2.7 for stack of 883-892 Stack = -1.7 for stack of 884-891 Helix total = -7.5 Hairpin = 5.0 for closure of 885-890 Stack = -2.7 for stack of 863-880 Helix total = -2.7 Internal/bulge = 0.4 for closure of 864-879 Size = 1 BP stack across bulge = -2.7 Stack = -2.9 for stack of 865-877 Stack = -1.3 for stack of 866-876 Helix total = -4.2 Hairpin = 5.5 for closure of 867-875 Stack = -1.3 for stack of 742-861 Stack = -1.3 for stack of 743-860 Stack = -2.7 for stack of 744-859 Stack = -4.2 for stack of 745-858 Stack = -2.7 for stack of 746-857 Helix total = -12.2 Internal/bulge = 4.2 for closure of 747-856 Size = 3 Stack = -2.9 for stack of 751-855 Stack = -1.8 for stack of 752-854 Stack = -2.7 for stack of 753-853 Stack = -3.1 for stack of 754-852 Stack = -1.7 for stack of 755-851 Helix total = -12.2 Multiloop = 2.5 for closure of 756-850 Stack = -2.7 for stack of 810-848 Helix total = -2.7 Internal/bulge = -1.8 for closure of 811-847 Size = 2 Stack = -4.0 for stack of 813-845 Stack = -4.0 for stack of 814-844 Stack = -2.7 for stack of 815-843 Stack = -2.1 for stack of 816-842 Helix total = -12.8 Hairpin = 7.0 for closure of 817-841 Stack = -3.2 for stack of 799-809 Stack = -1.4 for stack of 800-808 Helix total = -4.6 Hairpin = 4.7 for closure of 801-807 Stack = -1.7 for stack of 776-798 Stack = -1.4 for stack of 777-797 Helix total = -3.1 Internal/bulge = 2.0 for closure of 778-796 Size = 3 Stack = -2.9 for stack of 781-794 Stack = -1.8 for stack of 782-793 Stack = -2.9 for stack of 783-792 Stack = -4.0 for stack of 784-791 Helix total = -11.6 Hairpin = 3.7 for closure of 785-790 Stack = -1.7 for stack of 759-773 Stack = 0.2 for stack of 760-772 Stack = -1.4 for stack of 761-771 Stack = -1.4 for stack of 762-770 Stack = -2.7 for stack of 763-769 Helix total = -7.0 Hairpin = 5.1 for closure of 764-768 Stack = -4.2 for stack of 697-740 Helix total = -4.2 Internal/bulge = 0.1 for closure of 698-739 Size = 2 Stack = -3.2 for stack of 700-737 Stack = -0.8 for stack of 701-736 Helix total = -4.0 Internal/bulge = 2.5 for closure of 702-735 Size = 1 BP stack across bulge = -1.8 Stack = -1.9 for stack of 703-733 Helix total = -1.9 Internal/bulge = 2.4 for closure of 704-732 Size = 9 Stack = -3.2 for stack of 709-726 Stack = -2.7 for stack of 710-725 Stack = -1.8 for stack of 711-724 Stack = -2.7 for stack of 712-723 Stack = -3.1 for stack of 713-722 Helix total = -13.5 Hairpin = 4.5 for closure of 714-721 Stack = -4.2 for stack of 448-695 Helix total = -4.2 Internal/bulge = 3.8 for closure of 449-694 Size = 2 Stack = -2.9 for stack of 452-693 Stack = -2.8 for stack of 453-692 Stack = -0.8 for stack of 454-691 Stack = -2.1 for stack of 455-690 Helix total = -8.6 Internal/bulge = 2.5 for closure of 456-689 Size = 4 Stack = -2.7 for stack of 459-686 Stack = -4.2 for stack of 460-685 Helix total = -6.9 Internal/bulge = 2.2 for closure of 461-684 Size = 5 Stack = -3.1 for stack of 465-681 Stack = -2.9 for stack of 466-680 Stack = -2.7 for stack of 467-679 Helix total = -8.7 Internal/bulge = 1.2 for closure of 468-678 Size = 1 BP stack across bulge = -2.7 Helix total = 0.0 Internal/bulge = -0.3 for closure of 470-677 Size = 2 Stack = -2.7 for stack of 472-675 Stack = -1.3 for stack of 473-674 Stack = -2.7 for stack of 474-673 Stack = -3.1 for stack of 475-672 Stack = -1.7 for stack of 476-671 Helix total = -11.5 Internal/bulge = 1.7 for closure of 477-670 Size = 2 Stack = -1.3 for stack of 479-668 Stack = -1.3 for stack of 480-667 Helix total = -2.6 Internal/bulge = 0.7 for closure of 481-666 Size = 2 Stack = -2.7 for stack of 483-664 Helix total = -2.7 Internal/bulge = 3.8 for closure of 484-663 Size = 13 Stack = -2.7 for stack of 492-656 Stack = -4.2 for stack of 493-655 Helix total = -6.9 Internal/bulge = 0.3 for closure of 494-654 Size = 1 BP stack across bulge = -4.0 Stack = -2.7 for stack of 496-653 Stack = -2.7 for stack of 497-652 Helix total = -5.4 Multiloop = 7.6 for closure of 498-651 Stack = -2.7 for stack of 603-643 Stack = -1.3 for stack of 604-642 Helix total = -4.0 Internal/bulge = 1.7 for closure of 605-641 Size = 2 Stack = -1.3 for stack of 607-639 Stack = -2.9 for stack of 608-638 Stack = -1.7 for stack of 609-637 Stack = -2.8 for stack of 610-636 Helix total = -8.7 Hairpin = 5.6 for closure of 611-635 Stack = -0.8 for stack of 500-601 Stack = -1.4 for stack of 501-600 Stack = -3.2 for stack of 502-599 Stack = -2.7 for stack of 503-598 Stack = -0.8 for stack of 504-597 Stack = -3.2 for stack of 505-596 Helix total = -12.1 Internal/bulge = 3.8 for closure of 506-595 Size = 2 Stack = -2.7 for stack of 509-594 Stack = -4.2 for stack of 510-593 Stack = -2.7 for stack of 511-592 Helix total = -9.6 Internal/bulge = 0.7 for closure of 512-591 Size = 2 Stack = -4.0 for stack of 514-589 Stack = -2.9 for stack of 515-588 Helix total = -6.9 Multiloop = 5.0 for closure of 516-587 Stack = -1.7 for stack of 563-583 Stack = -1.9 for stack of 564-582 Stack = -3.1 for stack of 565-581 Stack = -2.7 for stack of 566-580 Helix total = -9.4 Hairpin = 6.0 for closure of 567-579 Stack = -2.0 for stack of 552-559 Helix total = -2.0 Hairpin = 1.3 for closure of 553-558 Stack = -1.4 for stack of 518-551 Stack = -1.3 for stack of 519-550 Stack = -0.8 for stack of 520-549 Stack = -1.9 for stack of 521-548 Helix total = -5.4 Internal/bulge = 1.7 for closure of 522-547 Size = 2 Stack = -2.9 for stack of 524-545 Stack = -2.7 for stack of 525-544 Helix total = -5.6 Internal/bulge = 4.7 for closure of 526-543 Size = 6 Stack = -3.1 for stack of 529-538 Stack = -2.7 for stack of 530-537 Helix total = -5.8 Hairpin = 3.7 for closure of 531-536 Stack = -4.2 for stack of 409-431 Stack = -2.7 for stack of 410-430 Stack = -1.7 for stack of 411-429 Stack = -1.8 for stack of 412-428 Stack = -1.7 for stack of 413-427 Helix total = -12.1 Internal/bulge = 1.7 for closure of 414-426 Size = 2 Stack = -2.1 for stack of 416-424 Stack = -0.8 for stack of 417-423 Helix total = -2.9 Hairpin = 5.8 for closure of 418-422 Stack = -4.0 for stack of 375-405 Stack = -2.9 for stack of 376-404 Stack = -1.8 for stack of 377-403 Helix total = -8.7 Internal/bulge = 1.3 for closure of 378-402 Size = 6 Stack = -3.2 for stack of 382-398 Stack = -0.8 for stack of 383-397 Stack = -2.7 for stack of 384-396 Helix total = -6.7 Hairpin = 5.3 for closure of 385-395 Stack = -3.1 for stack of 363-372 Helix total = -3.1 Hairpin = 4.5 for closure of 364-371 Stack = -2.7 for stack of 287-334 Stack = -4.0 for stack of 288-333 Stack = -3.1 for stack of 289-332 Helix total = -9.8 Internal/bulge = 2.8 for closure of 290-331 Size = 6 Stack = -1.3 for stack of 294-327 Stack = -1.3 for stack of 295-326 Helix total = -2.6 Internal/bulge = 3.0 for closure of 296-325 Size = 3 Stack = -1.7 for stack of 299-323 Stack = -2.1 for stack of 300-322 Helix total = -3.8 Internal/bulge = 4.5 for closure of 301-321 Size = 2 Stack = -1.3 for stack of 304-320 Stack = -1.8 for stack of 305-319 Stack = -0.8 for stack of 306-318 Stack = -3.2 for stack of 307-317 Helix total = -7.1 Hairpin = 2.7 for closure of 308-316 Stack = -1.3 for stack of 47-286 Helix total = -1.3 Internal/bulge = -2.3 for closure of 48-285 Size = 2 Stack = -2.7 for stack of 50-283 Stack = -1.3 for stack of 51-282 Helix total = -4.0 Internal/bulge = 2.2 for closure of 52-281 Size = 1 BP stack across bulge = -2.1 Stack = -0.8 for stack of 54-280 Stack = -3.1 for stack of 55-279 Stack = -2.7 for stack of 56-278 Stack = -1.3 for stack of 57-277 Stack = -2.1 for stack of 58-276 Helix total = -10.0 Internal/bulge = 4.5 for closure of 59-275 Size = 2 Stack = -2.7 for stack of 62-274 Helix total = -2.7 Multiloop = 0.5 for closure of 63-273 Stack = -4.0 for stack of 262-272 Stack = -3.2 for stack of 263-271 Stack = -0.4 for stack of 264-270 Helix total = -7.6 Hairpin = 5.8 for closure of 265-269 Stack = -2.7 for stack of 240-252 Stack = -3.2 for stack of 241-251 Stack = -0.8 for stack of 242-250 Stack = -1.4 for stack of 243-249 Helix total = -8.1 Hairpin = 5.8 for closure of 244-248 Stack = -2.7 for stack of 193-238 Helix total = -2.7 Internal/bulge = 1.7 for closure of 194-237 Size = 5 Stack = -0.8 for stack of 198-234 Stack = -2.1 for stack of 199-233 Stack = -0.8 for stack of 200-232 Stack = -2.8 for stack of 201-231 Stack = -3.2 for stack of 202-230 Stack = -1.4 for stack of 203-229 Helix total = -11.1 Internal/bulge = 4.5 for closure of 204-228 Size = 2 Stack = -3.1 for stack of 207-227 Stack = -4.0 for stack of 208-226 Stack = -2.7 for stack of 209-225 Stack = -1.7 for stack of 210-224 Helix total = -11.5 Hairpin = 6.3 for closure of 211-223 Stack = -1.4 for stack of 170-192 Stack = -2.1 for stack of 171-191 Stack = -1.7 for stack of 172-190 Stack = -2.7 for stack of 173-189 Stack = -4.0 for stack of 174-188 Stack = -3.1 for stack of 175-187 Helix total = -15.0 Hairpin = 4.9 for closure of 176-186 Stack = -2.7 for stack of 66-168 Stack = -3.1 for stack of 67-167 Stack = -2.8 for stack of 68-166 Stack = -0.4 for stack of 69-165 Stack = -1.9 for stack of 70-164 Stack = -2.7 for stack of 71-163 Stack = -2.0 for stack of 72-162 Stack = -3.2 for stack of 73-161 Helix total = -18.8 Multiloop = 6.9 for closure of 74-160 Stack = -3.1 for stack of 116-156 Stack = -4.0 for stack of 117-155 Stack = -2.7 for stack of 118-154 Stack = -1.3 for stack of 119-153 Stack = -3.1 for stack of 120-152 Stack = -2.8 for stack of 121-151 Stack = -0.4 for stack of 122-150 Stack = -1.4 for stack of 123-149 Stack = -2.1 for stack of 124-148 Helix total = -20.9 Internal/bulge = 1.6 for closure of 125-147 Size = 1 BP stack across bulge = -1.9 Stack = -1.4 for stack of 126-145 Stack = -1.9 for stack of 127-144 Stack = -1.4 for stack of 128-143 Stack = -2.0 for stack of 129-142 Stack = -2.7 for stack of 130-141 Stack = -1.3 for stack of 131-140 Stack = -2.9 for stack of 132-139 Helix total = -13.6 Hairpin = 4.6 for closure of 133-138 Stack = -1.3 for stack of 77-114 Stack = -2.7 for stack of 78-113 Stack = -4.0 for stack of 79-112 Stack = -3.1 for stack of 80-111 Helix total = -11.1 Internal/bulge = 1.6 for closure of 81-110 Size = 1 BP stack across bulge = -2.7 Stack = -3.1 for stack of 82-108 Stack = -1.7 for stack of 83-107 Helix total = -4.8 Internal/bulge = 3.4 for closure of 84-106 Size = 9 Stack = -2.7 for stack of 90-101 Stack = -4.0 for stack of 91-100 Helix total = -6.7 Hairpin = 3.4 for closure of 92-99 Stack = -2.7 for stack of 5-45 Stack = -2.7 for stack of 6-44 Helix total = -5.4 Internal/bulge = 0.8 for closure of 7-43 Size = 1 BP stack across bulge = -3.1 Stack = -2.9 for stack of 9-42 Stack = -4.0 for stack of 10-41 Helix total = -6.9 Internal/bulge = 4.5 for closure of 11-40 Size = 4 Stack = -2.7 for stack of 16-39 Helix total = -2.7 Internal/bulge = 1.2 for closure of 17-38 Size = 1 BP stack across bulge = -3.1 Stack = -2.7 for stack of 18-36 Stack = -3.2 for stack of 19-35 Stack = -1.4 for stack of 20-34 Stack = -2.9 for stack of 21-33 Stack = -2.8 for stack of 22-32 Stack = -0.8 for stack of 23-31 Stack = -2.7 for stack of 24-30 Helix total = -16.5 Hairpin = 5.1 for closure of 25-29 Total energy = -326.3