Thermodynamic details for structure # 1 Exterior loop = -0.1 Stack = -2.4 for stack of 371-1002 Stack = -2.1 for stack of 372-1001 Stack = -0.9 for stack of 373-1000 Stack = -2.1 for stack of 374-999 Stack = -1.5 for stack of 375-998 Stack = -1.4 for stack of 376-997 Helix total = -10.4 Multiloop = -0.2 for closure of 377-996 Stack = -1.4 for stack of 937-993 Stack = 0.3 for stack of 938-992 Stack = -0.5 for stack of 939-991 Stack = -1.3 for stack of 940-990 Stack = -1.4 for stack of 941-989 Stack = -1.4 for stack of 942-988 Stack = -3.4 for stack of 943-987 Stack = -2.1 for stack of 944-986 Stack = -1.3 for stack of 945-985 Helix total = -12.5 Multiloop = 7.6 for closure of 946-984 Stack = -2.4 for stack of 961-970 Helix total = -2.4 Hairpin = 3.1 for closure of 962-969 Stack = -2.1 for stack of 950-959 Helix total = -2.1 Hairpin = 4.1 for closure of 951-958 Stack = -2.1 for stack of 921-936 Stack = -0.9 for stack of 922-935 Stack = -2.4 for stack of 923-934 Stack = -2.1 for stack of 924-933 Stack = -2.4 for stack of 925-932 Helix total = -9.9 Hairpin = 4.6 for closure of 926-931 Stack = -2.1 for stack of 438-919 Stack = -1.1 for stack of 439-918 Stack = -0.9 for stack of 440-917 Stack = -1.3 for stack of 441-916 Stack = -0.9 for stack of 442-915 Helix total = -6.3 Multiloop = 1.9 for closure of 443-914 Stack = -3.3 for stack of 904-912 Helix total = -3.3 Hairpin = 4.6 for closure of 905-911 Stack = -0.9 for stack of 463-902 Stack = -2.1 for stack of 464-901 Stack = -2.4 for stack of 465-900 Stack = -2.2 for stack of 466-899 Stack = -2.1 for stack of 467-898 Helix total = -9.7 Multiloop = 4.7 for closure of 468-897 Stack = -2.1 for stack of 883-892 Stack = -1.1 for stack of 884-891 Helix total = -3.2 Hairpin = 5.3 for closure of 885-890 Stack = -3.3 for stack of 470-878 Helix total = -3.3 Internal/bulge = 3.0 for closure of 471-877 Size = 3 Stack = -0.9 for stack of 473-874 Stack = -2.1 for stack of 474-873 Helix total = -3.0 Internal/bulge = 3.7 for closure of 475-872 Size = 9 Stack = -0.9 for stack of 481-867 Stack = -2.2 for stack of 482-866 Stack = -2.1 for stack of 483-865 Stack = -2.1 for stack of 484-864 Stack = -3.3 for stack of 485-863 Helix total = -10.6 Multiloop = 4.9 for closure of 486-862 Stack = -0.9 for stack of 590-860 Stack = -2.1 for stack of 591-859 Stack = -3.4 for stack of 592-858 Stack = -2.1 for stack of 593-857 Stack = -2.1 for stack of 594-856 Stack = -2.2 for stack of 595-855 Helix total = -12.8 Internal/bulge = 3.2 for closure of 596-854 Size = 6 Stack = -1.3 for stack of 599-849 Stack = -2.1 for stack of 600-848 Stack = -2.4 for stack of 601-847 Stack = -2.2 for stack of 602-846 Stack = -2.1 for stack of 603-845 Stack = -0.5 for stack of 604-844 Helix total = -10.6 Multiloop = 5.5 for closure of 605-843 Stack = -2.1 for stack of 815-841 Stack = -0.9 for stack of 816-840 Stack = -2.4 for stack of 817-839 Stack = -2.1 for stack of 818-838 Stack = -0.6 for stack of 819-837 Helix total = -8.1 Internal/bulge = 5.4 for closure of 820-836 Size = 6 Stack = -1.1 for stack of 821-829 Stack = -2.1 for stack of 822-828 Helix total = -3.2 Hairpin = 5.4 for closure of 823-827 Stack = -3.3 for stack of 610-814 Stack = -2.4 for stack of 611-813 Helix total = -5.7 Multiloop = 5.1 for closure of 612-812 Stack = -2.1 for stack of 798-810 Stack = -2.5 for stack of 799-809 Stack = -0.5 for stack of 800-808 Helix total = -5.1 Hairpin = 4.8 for closure of 801-807 Stack = -2.2 for stack of 781-794 Stack = -1.3 for stack of 782-793 Stack = -2.2 for stack of 783-792 Stack = -3.3 for stack of 784-791 Helix total = -9.0 Hairpin = 4.1 for closure of 785-790 Stack = -2.4 for stack of 616-780 Stack = -3.3 for stack of 617-779 Stack = -2.1 for stack of 618-778 Stack = -1.1 for stack of 619-777 Helix total = -8.9 Internal/bulge = 4.2 for closure of 620-776 Size = 3 Stack = -2.5 for stack of 621-772 Stack = -3.3 for stack of 622-771 Stack = -2.1 for stack of 623-770 Stack = -2.1 for stack of 624-769 Stack = -2.2 for stack of 625-768 Helix total = -12.2 Internal/bulge = 5.0 for closure of 626-767 Size = 5 Stack = -2.2 for stack of 627-761 Stack = -2.4 for stack of 628-760 Stack = -2.2 for stack of 629-759 Stack = -2.1 for stack of 630-758 Stack = -2.4 for stack of 631-757 Helix total = -11.3 Multiloop = 5.3 for closure of 632-756 Stack = -2.1 for stack of 746-754 Stack = -1.3 for stack of 747-753 Helix total = -3.4 Hairpin = 5.9 for closure of 748-752 Stack = -3.4 for stack of 634-740 Stack = -2.1 for stack of 635-739 Stack = -2.1 for stack of 636-738 Stack = -2.5 for stack of 637-737 Helix total = -10.1 Internal/bulge = 5.4 for closure of 638-736 Size = 6 Stack = -2.1 for stack of 645-735 Stack = -2.4 for stack of 646-734 Stack = -2.2 for stack of 647-733 Stack = -2.1 for stack of 648-732 Helix total = -8.8 Internal/bulge = 3.8 for closure of 649-731 Size = 2 Stack = -2.1 for stack of 652-730 Stack = -3.3 for stack of 653-729 Stack = -3.4 for stack of 654-728 Helix total = -8.8 Multiloop = 6.1 for closure of 655-727 Stack = -2.5 for stack of 709-726 Stack = -2.1 for stack of 710-725 Stack = -1.3 for stack of 711-724 Stack = -2.1 for stack of 712-723 Stack = -2.4 for stack of 713-722 Helix total = -10.4 Hairpin = 5.1 for closure of 714-721 Stack = -1.3 for stack of 675-702 Stack = -2.2 for stack of 676-701 Stack = -2.1 for stack of 677-700 Helix total = -5.6 Internal/bulge = 2.9 for closure of 678-699 Size = 10 Stack = -2.5 for stack of 684-693 Helix total = -2.5 Hairpin = 4.0 for closure of 685-692 Stack = -2.1 for stack of 663-673 Stack = -2.4 for stack of 664-672 Stack = -1.1 for stack of 665-671 Helix total = -5.6 Hairpin = 5.9 for closure of 666-670 Stack = -2.1 for stack of 546-583 Stack = -1.1 for stack of 547-582 Stack = -1.3 for stack of 548-581 Stack = -0.6 for stack of 549-580 Stack = -2.1 for stack of 550-579 Stack = -3.3 for stack of 551-578 Stack = -1.5 for stack of 552-577 Helix total = -12.0 Hairpin = 4.1 for closure of 553-576 Stack = -2.5 for stack of 493-545 Stack = -2.1 for stack of 494-544 Stack = -2.2 for stack of 495-543 Stack = -2.1 for stack of 496-542 Stack = -0.6 for stack of 497-541 Helix total = -9.5 Multiloop = 7.6 for closure of 498-540 Stack = -0.9 for stack of 528-539 Stack = -2.4 for stack of 529-538 Stack = -2.1 for stack of 530-537 Helix total = -5.4 Hairpin = 4.1 for closure of 531-536 Stack = -0.9 for stack of 500-520 Stack = -1.0 for stack of 501-519 Stack = -2.5 for stack of 502-518 Stack = -2.1 for stack of 503-517 Helix total = -6.5 Internal/bulge = 1.6 for closure of 504-516 Size = 1 BP stack across bulge = -2.2 Stack = -3.3 for stack of 506-515 Helix total = -3.3 Hairpin = 3.9 for closure of 507-514 Stack = -3.4 for stack of 448-461 Stack = -2.1 for stack of 449-460 Helix total = -5.5 Hairpin = 5.0 for closure of 450-459 Stack = -3.4 for stack of 409-431 Stack = -2.1 for stack of 410-430 Stack = -1.1 for stack of 411-429 Stack = -1.3 for stack of 412-428 Stack = -1.1 for stack of 413-427 Helix total = -9.0 Internal/bulge = 2.9 for closure of 414-426 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 416-425 Stack = -1.3 for stack of 417-424 Helix total = -2.2 Hairpin = 4.7 for closure of 418-423 Stack = -2.2 for stack of 379-404 Stack = -1.3 for stack of 380-403 Helix total = -3.5 Internal/bulge = 2.7 for closure of 381-402 Size = 1 BP stack across bulge = -1.1 Stack = -0.9 for stack of 383-401 Helix total = -0.9 Internal/bulge = 0.4 for closure of 384-400 Size = 1 BP stack across bulge = -2.1 Stack = -2.5 for stack of 385-398 Stack = -0.6 for stack of 386-397 Stack = -2.1 for stack of 387-396 Stack = -3.3 for stack of 388-395 Helix total = -8.5 Hairpin = 4.1 for closure of 389-394 Stack = -2.1 for stack of 2-361 Stack = -3.3 for stack of 3-360 Stack = -3.4 for stack of 4-359 Stack = -2.1 for stack of 5-358 Helix total = -10.9 Internal/bulge = 5.1 for closure of 6-357 Size = 22 Stack = -3.3 for stack of 10-337 Stack = -2.1 for stack of 11-336 Stack = -1.1 for stack of 12-335 Helix total = -6.5 Internal/bulge = 1.2 for closure of 13-334 Size = 2 Stack = -2.4 for stack of 15-332 Helix total = -2.4 Internal/bulge = 4.2 for closure of 16-331 Size = 3 Stack = -1.3 for stack of 17-327 Stack = -0.6 for stack of 18-326 Stack = -1.4 for stack of 19-325 Stack = -1.3 for stack of 20-324 Helix total = -4.6 Internal/bulge = 1.6 for closure of 21-323 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 22-321 Stack = -0.9 for stack of 23-320 Stack = -1.0 for stack of 24-319 Helix total = -4.0 Internal/bulge = 3.6 for closure of 25-318 Size = 14 Stack = -3.4 for stack of 34-311 Helix total = -3.4 Internal/bulge = 0.4 for closure of 35-310 Size = 2 Stack = -3.4 for stack of 37-308 Stack = -2.1 for stack of 38-307 Stack = -1.0 for stack of 39-306 Helix total = -6.5 Internal/bulge = 4.1 for closure of 40-305 Size = 7 Stack = -1.3 for stack of 45-301 Stack = -1.1 for stack of 46-300 Helix total = -2.4 Internal/bulge = 3.3 for closure of 47-299 Size = 2 Stack = -2.1 for stack of 50-298 Stack = -0.9 for stack of 51-297 Helix total = -3.0 Internal/bulge = 2.9 for closure of 52-296 Size = 1 BP stack across bulge = -0.9 Stack = -0.9 for stack of 54-295 Stack = -2.4 for stack of 55-294 Stack = -2.1 for stack of 56-293 Stack = -0.9 for stack of 57-292 Stack = -0.9 for stack of 58-291 Helix total = -7.2 Internal/bulge = 2.5 for closure of 59-290 Size = 1 BP stack across bulge = -1.3 Stack = -0.5 for stack of 61-289 Stack = 0.3 for stack of 62-288 Stack = -1.4 for stack of 63-287 Helix total = -1.6 Internal/bulge = 3.8 for closure of 64-286 Size = 2 Stack = -2.4 for stack of 67-285 Stack = -2.1 for stack of 68-284 Helix total = -4.5 Internal/bulge = 6.2 for closure of 69-283 Size = 13 Stack = -1.4 for stack of 70-269 Stack = -2.1 for stack of 71-268 Stack = -3.3 for stack of 72-267 Stack = -3.4 for stack of 73-266 Helix total = -10.2 Internal/bulge = 5.8 for closure of 74-265 Size = 13 Stack = -2.1 for stack of 87-263 Stack = -0.6 for stack of 88-262 Helix total = -2.7 Internal/bulge = 4.2 for closure of 89-261 Size = 3 Helix total = 0.0 Internal/bulge = 0.3 for closure of 93-260 Size = 1 BP stack across bulge = -2.2 Stack = -2.1 for stack of 95-259 Stack = -1.3 for stack of 96-258 Stack = -0.9 for stack of 97-257 Stack = -2.2 for stack of 98-256 Helix total = -6.5 Multiloop = 7.5 for closure of 99-255 Stack = -1.4 for stack of 241-254 Stack = -0.9 for stack of 242-253 Stack = -2.1 for stack of 243-252 Helix total = -4.4 Hairpin = 4.1 for closure of 244-251 Stack = -2.1 for stack of 101-231 Stack = -3.4 for stack of 102-230 Stack = -3.3 for stack of 103-229 Helix total = -8.8 Internal/bulge = 2.5 for closure of 104-228 Size = 3 Stack = -1.5 for stack of 107-226 Stack = -2.1 for stack of 108-225 Stack = -1.1 for stack of 109-224 Helix total = -4.7 Multiloop = 7.2 for closure of 110-223 Stack = -2.4 for stack of 161-221 Stack = -2.1 for stack of 162-220 Stack = -1.1 for stack of 163-219 Helix total = -5.6 Internal/bulge = 2.3 for closure of 164-218 Size = 11 Stack = -2.4 for stack of 171-212 Stack = -1.1 for stack of 172-211 Stack = -2.1 for stack of 173-210 Stack = -3.3 for stack of 174-209 Stack = -2.4 for stack of 175-208 Helix total = -11.3 Internal/bulge = 1.6 for closure of 176-207 Size = 10 Stack = -2.1 for stack of 182-201 Stack = -2.4 for stack of 183-200 Stack = -2.1 for stack of 184-199 Stack = -1.3 for stack of 185-198 Helix total = -7.9 Internal/bulge = 1.2 for closure of 186-197 Size = 2 Stack = -2.1 for stack of 188-195 Helix total = -2.1 Hairpin = 5.3 for closure of 189-194 Stack = -2.4 for stack of 116-156 Stack = -3.3 for stack of 117-155 Stack = -2.1 for stack of 118-154 Stack = -0.9 for stack of 119-153 Stack = -2.4 for stack of 120-152 Helix total = -11.1 Internal/bulge = 2.2 for closure of 121-151 Size = 3 Stack = -0.5 for stack of 123-148 Stack = -1.3 for stack of 124-147 Stack = -1.4 for stack of 125-146 Stack = -1.0 for stack of 126-145 Stack = -1.4 for stack of 127-144 Stack = -0.5 for stack of 128-143 Stack = -1.5 for stack of 129-142 Stack = -2.1 for stack of 130-141 Stack = -0.9 for stack of 131-140 Stack = -2.2 for stack of 132-139 Helix total = -12.8 Hairpin = 4.8 for closure of 133-138 Total energy = -166.9