Welcome to the RemovePseudoknots Web Server

The RemovePseudoknots server takes a CT file which contains one or more pseudoknotted structures, and removes pseudoknots from each structure. Note that this server may take a significant amount of time, particularly if structures are large.

If you plan to leave this page while waiting for calculations to complete, please make sure you have entered a valid email address below. Leaving this page without entering a valid email address will render results inaccessible.

If you need specific help using the RemovePseudoknots server, please click here.

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RNAstructure tools have been updated to version which includes several improvements.
Please contact us with any questions or issues regarding this update.

Select CT Input:




Select Nucleic Acid Type:




Select RemovePseudoknots Options:

If a default value is left blank, the value is treated as if it was not changed at all.



Designate Address to Email Results: