RNAstructure multilign Results
(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)

Alignment:

Predict31.fasta CACCCACCATACACCCTGTCCAC-A---T-G-CCT-GACCT-C-A-T--G-CG--
Predict32.fasta GCCGGCGAGAACTCGTC-----------C-CATTG-TGTGT-G-C-TCCGTGG--
Predict33.fasta CCAACCGCATGACGA-------GGCTATGGG-ACG-CTTG--CCCTGC-C-CG--
Predict34.fasta CCACAGTCCGGACCTC------------A-C-GTTGCTACCGGCG-C--C-GTCG
Predict35.fasta CCACAGTCCGGACCCC------------A-C-GTTGCTACCGGCG-C--C-GTCG
Predict36.fasta GCCAGCGAGAACTCGTC-----------C-CATTG-TGTGT-G-C-TCCGTGG--

Download alignment file multilign/multilign.ali

Structures derived from sequence 1:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 2:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 3:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 4:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 5:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 6:

Download Structure: SVG JPEG PNG PDF PS CT

Command Line:
multilign-smp multilign.config

RNAstructure

Web Servers for RNA Secondary Structure Prediction

RNAstructure multilign Results(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)

Alignment:

Download alignment file multilign/multilign.ali

Structures derived from sequence 1:

Structures derived from sequence 2:

Structures derived from sequence 3:

Structures derived from sequence 4:

Structures derived from sequence 5:

Structures derived from sequence 6:

RNAstructure multilign Results
(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)