RNAstructure TurboFold Results
(Calculate the conserved structures of three or more unaligned sequences using iteratively refined partition functions.)

Alignment:

LETRA_AG_1_rep=OL774864.1_n=1_LETRA_AG_from_1_genomes__representative=OL774864.1    UUCUAUUCUCCUCCUUUGGAGAUGGAAGACUUAUGCUUUGAGUCACGUCUUCUCUCUCAA
LETRA_AG_2_rep=OL774865.1_n=1_LETRA_AG_from_1_genomes__representative=OL774865.1    CAAUUUCUGAGUCC---------AUGCUUUCACAACCU-------CACGUUCUCUUAAAA
LETRA_AG_3_rep=FJ554526.1_n=1_LETRA_AG_from_1_genomes__representative=FJ554526.1    UGCAAACCAAAGAC---------AAUUAACUCGAUCCUCGAGCUAAGUGCCUGAGGUUGC

LETRA_AG_1_rep=OL774864.1_n=1_LETRA_AG_from_1_genomes__representative=OL774864.1    A---AGAAUCUUAUAAAAAUGCAACCCCCACCGGAAA--GC---UGGCGUCCCGAAAGAG
LETRA_AG_2_rep=OL774865.1_n=1_LETRA_AG_from_1_genomes__representative=OL774865.1    A---GUAACCUCCUAGGUAUUGAGGCCCCU----CAA--GC---UGGCGACCCGCACCAG
LETRA_AG_3_rep=FJ554526.1_n=1_LETRA_AG_from_1_genomes__representative=FJ554526.1    CCUCGGCAUCUUUU-UUUCUUCUGCCUCUU----CGGCGGCUCUUCGUUUCCUGGUGCGG

LETRA_AG_1_rep=OL774864.1_n=1_LETRA_AG_from_1_genomes__representative=OL774864.1    CAAGCGA---UCUGCGGAGGAGACCACAACGGCCCCAAGAAAAGAGCCAAAGAAAAA--A
LETRA_AG_2_rep=OL774865.1_n=1_LETRA_AG_from_1_genomes__representative=OL774865.1    GAAGCGAAGAGCCGCCGAGGAGG-----------------------CAGAAGAAAAA--A
LETRA_AG_3_rep=FJ554526.1_n=1_LETRA_AG_from_1_genomes__representative=FJ554526.1    GUCGCCAGUUU-----GAAGGGC-----------------------CACAAGACAGAGGA

LETRA_AG_1_rep=OL774864.1_n=1_LETRA_AG_from_1_genomes__representative=OL774864.1    AACCCA---CGAGAUCAC--UCC--GUU--------UUGAACCUCAAACAGAGUU--CGA
LETRA_AG_2_rep=OL774865.1_n=1_LETRA_AG_from_1_genomes__representative=OL774865.1    AGAUGC---CGGGAGCAACCUCAGGCAC--------CUGAUCUGGAGAUU-------GGA
LETRA_AG_3_rep=FJ554526.1_n=1_LETRA_AG_from_1_genomes__representative=FJ554526.1    GGUUGCGUUUUUAAGAGAAGAUGGGCAGGUGAAGCAUGGACUCAGAAAUUAUGUUCAUGC

LETRA_AG_1_rep=OL774864.1_n=1_LETRA_AG_from_1_genomes__representative=OL774864.1    AAACUA
LETRA_AG_2_rep=OL774865.1_n=1_LETRA_AG_from_1_genomes__representative=OL774865.1    UCAGUU
LETRA_AG_3_rep=FJ554526.1_n=1_LETRA_AG_from_1_genomes__representative=FJ554526.1    UUUGCA

RNAstructure

Web Servers for RNA Secondary Structure Prediction

RNAstructure TurboFold Results
(Calculate the conserved structures of three or more unaligned sequences using iteratively refined partition functions.)

Alignment:

Download alignment file TurboFold/TurboFold.aln

Structures derived from sequence 1:

Structures derived from sequence 2:

Structures derived from sequence 3:

RNAstructure

Web Servers for RNA Secondary Structure Prediction

RNAstructure TurboFold Results(Calculate the conserved structures of three or more unaligned sequences using iteratively refined partition functions.)

Alignment:

Download alignment file TurboFold/TurboFold.aln

Structures derived from sequence 1:

Structures derived from sequence 2:

Structures derived from sequence 3:

RNAstructure TurboFold Results
(Calculate the conserved structures of three or more unaligned sequences using iteratively refined partition functions.)