RNAstructure multilign Results
(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)

Alignment:

Predict31.fasta ACATTCCTAAGTCTGAAACATTACAG---CT-TGCTACACG-AGAAGAGCCGCCATAGTATTTT----
Predict32.fasta TATCACCAGGCAGTTGAC-----------AG-TGTAGCAAG-CTGTAATAGATGCGAGGGTCCAATAC
Predict33.fasta TCAACTGCCTGGTGATAAAACGACACTACGTGGGAAT---CTACTATGGCGGCTCTTC----------
Predict34.fasta TTCAGACTTAGGAATGTGCTTCC------CA-CGTA----G-TGTCGTTTGATTGGACCTCGCAT---

Download alignment file multilign/multilign.ali

Structures derived from sequence 1:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 2:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 3:

Download All Structures: PDF PS CT

Download Individual Structures:

Structure 1: PDF SVG PS JPEG PNG CT

Structure 2: PDF SVG PS JPEG PNG CT

Structures derived from sequence 4:

Download Structure: SVG JPEG PNG PDF PS CT

Command Line:
multilign-smp multilign.config

RNAstructure

Web Servers for RNA Secondary Structure Prediction

RNAstructure multilign Results(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)

Alignment:

Download alignment file multilign/multilign.ali

Structures derived from sequence 1:

Structures derived from sequence 2:

Structures derived from sequence 3:

Structures derived from sequence 4:

RNAstructure multilign Results
(Predict low free energy secondary structures common to three or more sequences using progressive iterations of Dynalign.)