RNAstructure Predict a Secondary Structure Common to Two Sequences Results
RNAstructure dynalign Results
(Calculate the lowest free energy secondary structures common to two unaligned sequences.)
Alignment:
Download alignment file dynalign.ali
Structures derived from sequence 1:
Structures derived from sequence 2:
Command Line:
dynalign-smp dynalign.config
RNAstructure PARTS Results
(Predict the common secondary structure, including base pair probabilities, for two unaligned sequences.)
Alignment:
Download alignment file PARTS/PARTS.ali
Structures derived from sequence 1:
Structures derived from sequence 2:
Command Line:
PARTS PARTS.config