RNAstructure PARTS Results
(Predict the common secondary structure, including base pair probabilities, for two unaligned sequences.)

Alignment:

seq1-seq2 MAP Alignment:
CACCGCCCGUCACCCUCCUCAAGUAUACUUCAAAGGACAUUUAACUAAAACCCCUACGCAUUUAUAUAGAGGAGACAAGUCGUAACAU
CACCGCCCGUCACCCUCCUCAAGUAUACUUCUAAGGACAUUUAACUAAAACCCCUACGCAUUUAUAUAGAGGAGACGAGUCGUAACAU

Download alignment file PARTS/PARTS.ali

Structures derived from sequence 1:

Download Structure: SVG JPEG PNG PDF PS CT

Structures derived from sequence 2:

Download Structure: SVG JPEG PNG PDF PS CT

Command Line:
PARTS PARTS.config