JOB_START_TIME: 1766712584343
/var/www/html/RNAstructureWeb/Executables/current/partition-smp sequence.txt partition.pfs --temperature 310.15  [SUCCESS time: 1714980 ms]
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/var/www/html/RNAstructureWeb/Executables/current/ProbabilityPlot partition.pfs partition.svg -max 2 --svg  [SUCCESS time: 2047 ms]
/var/www/html/RNAstructureWeb/Executables/current/Fold-smp sequence.txt Fold.ct --loop 30 --maximum 1000 --percent 10 --temperature 310.15 --window 3  [SUCCESS time: 476993 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct Fold.ps -p partition/partition.pfs  [SUCCESS time: 2491557 ms]
ps2pdf Fold.ps Fold.pdf  [SUCCESS time: 192815 ms]
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ps2pdf 1.ps 1.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1.svg -n 1 -p partition/partition.pfs --svg  [SUCCESS time: 3682 ms]
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ps2pdf 2.ps 2.pdf  [SUCCESS time: 273 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 2.svg -n 2 -p partition/partition.pfs --svg  [SUCCESS time: 3685 ms]
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ps2pdf 3.ps 3.pdf  [SUCCESS time: 273 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 3.svg -n 3 -p partition/partition.pfs --svg  [SUCCESS time: 3685 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 4.ps -n 4 -p partition/partition.pfs  [SUCCESS time: 3685 ms]
ps2pdf 4.ps 4.pdf  [SUCCESS time: 269 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 4.svg -n 4 -p partition/partition.pfs --svg  [SUCCESS time: 3713 ms]
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ps2pdf 5.ps 5.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 5.svg -n 5 -p partition/partition.pfs --svg  [SUCCESS time: 3693 ms]
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ps2pdf 6.ps 6.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 6.svg -n 6 -p partition/partition.pfs --svg  [SUCCESS time: 3688 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 7.svg -n 7 -p partition/partition.pfs --svg  [SUCCESS time: 3714 ms]
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ps2pdf 8.ps 8.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 8.svg -n 8 -p partition/partition.pfs --svg  [SUCCESS time: 3709 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 9.svg -n 9 -p partition/partition.pfs --svg  [SUCCESS time: 3688 ms]
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ps2pdf 10.ps 10.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 10.svg -n 10 -p partition/partition.pfs --svg  [SUCCESS time: 3692 ms]
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ps2pdf 11.ps 11.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 11.svg -n 11 -p partition/partition.pfs --svg  [SUCCESS time: 3702 ms]
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ps2pdf 12.ps 12.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 12.svg -n 12 -p partition/partition.pfs --svg  [SUCCESS time: 3704 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 13.svg -n 13 -p partition/partition.pfs --svg  [SUCCESS time: 3680 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 14.svg -n 14 -p partition/partition.pfs --svg  [SUCCESS time: 3717 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 15.svg -n 15 -p partition/partition.pfs --svg  [SUCCESS time: 3703 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 16.svg -n 16 -p partition/partition.pfs --svg  [SUCCESS time: 3697 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 17.svg -n 17 -p partition/partition.pfs --svg  [SUCCESS time: 3684 ms]
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ps2pdf 18.ps 18.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 18.svg -n 18 -p partition/partition.pfs --svg  [SUCCESS time: 3697 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 19.svg -n 19 -p partition/partition.pfs --svg  [SUCCESS time: 3718 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 20.svg -n 20 -p partition/partition.pfs --svg  [SUCCESS time: 3704 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 21.svg -n 21 -p partition/partition.pfs --svg  [SUCCESS time: 3735 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 22.svg -n 22 -p partition/partition.pfs --svg  [SUCCESS time: 3714 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 23.svg -n 23 -p partition/partition.pfs --svg  [SUCCESS time: 3707 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 24.svg -n 24 -p partition/partition.pfs --svg  [SUCCESS time: 3708 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 25.svg -n 25 -p partition/partition.pfs --svg  [SUCCESS time: 3722 ms]
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ps2pdf 26.ps 26.pdf  [SUCCESS time: 273 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 26.svg -n 26 -p partition/partition.pfs --svg  [SUCCESS time: 3700 ms]
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ps2pdf 27.ps 27.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 27.svg -n 27 -p partition/partition.pfs --svg  [SUCCESS time: 3691 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 28.ps -n 28 -p partition/partition.pfs  [SUCCESS time: 3676 ms]
ps2pdf 28.ps 28.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 28.svg -n 28 -p partition/partition.pfs --svg  [SUCCESS time: 3697 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 29.ps -n 29 -p partition/partition.pfs  [SUCCESS time: 3682 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 29.svg -n 29 -p partition/partition.pfs --svg  [SUCCESS time: 3680 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 30.svg -n 30 -p partition/partition.pfs --svg  [SUCCESS time: 3688 ms]
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ps2pdf 31.ps 31.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 31.svg -n 31 -p partition/partition.pfs --svg  [SUCCESS time: 3685 ms]
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ps2pdf 32.ps 32.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 32.svg -n 32 -p partition/partition.pfs --svg  [SUCCESS time: 3676 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 33.svg -n 33 -p partition/partition.pfs --svg  [SUCCESS time: 3713 ms]
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ps2pdf 34.ps 34.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 34.svg -n 34 -p partition/partition.pfs --svg  [SUCCESS time: 3702 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 35.svg -n 35 -p partition/partition.pfs --svg  [SUCCESS time: 3713 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 36.ps -n 36 -p partition/partition.pfs  [SUCCESS time: 3700 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 36.svg -n 36 -p partition/partition.pfs --svg  [SUCCESS time: 3719 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 37.ps -n 37 -p partition/partition.pfs  [SUCCESS time: 3703 ms]
ps2pdf 37.ps 37.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 37.svg -n 37 -p partition/partition.pfs --svg  [SUCCESS time: 3745 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 38.svg -n 38 -p partition/partition.pfs --svg  [SUCCESS time: 3719 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 39.svg -n 39 -p partition/partition.pfs --svg  [SUCCESS time: 3701 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 42.svg -n 42 -p partition/partition.pfs --svg  [SUCCESS time: 3696 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 43.svg -n 43 -p partition/partition.pfs --svg  [SUCCESS time: 3725 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 46.svg -n 46 -p partition/partition.pfs --svg  [SUCCESS time: 3683 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 48.svg -n 48 -p partition/partition.pfs --svg  [SUCCESS time: 3690 ms]
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/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 985.ps -n 985 -p partition/partition.pfs  [SUCCESS time: 3681 ms]
ps2pdf 985.ps 985.pdf  [SUCCESS time: 273 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 985.svg -n 985 -p partition/partition.pfs --svg  [SUCCESS time: 3718 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 986.ps -n 986 -p partition/partition.pfs  [SUCCESS time: 3686 ms]
ps2pdf 986.ps 986.pdf  [SUCCESS time: 273 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 986.svg -n 986 -p partition/partition.pfs --svg  [SUCCESS time: 3683 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 987.ps -n 987 -p partition/partition.pfs  [SUCCESS time: 3710 ms]
ps2pdf 987.ps 987.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 987.svg -n 987 -p partition/partition.pfs --svg  [SUCCESS time: 3674 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 988.ps -n 988 -p partition/partition.pfs  [SUCCESS time: 3703 ms]
ps2pdf 988.ps 988.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 988.svg -n 988 -p partition/partition.pfs --svg  [SUCCESS time: 3687 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 989.ps -n 989 -p partition/partition.pfs  [SUCCESS time: 3678 ms]
ps2pdf 989.ps 989.pdf  [SUCCESS time: 269 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 989.svg -n 989 -p partition/partition.pfs --svg  [SUCCESS time: 3704 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 990.ps -n 990 -p partition/partition.pfs  [SUCCESS time: 3688 ms]
ps2pdf 990.ps 990.pdf  [SUCCESS time: 269 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 990.svg -n 990 -p partition/partition.pfs --svg  [SUCCESS time: 3714 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 991.ps -n 991 -p partition/partition.pfs  [SUCCESS time: 3690 ms]
ps2pdf 991.ps 991.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 991.svg -n 991 -p partition/partition.pfs --svg  [SUCCESS time: 3690 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 992.ps -n 992 -p partition/partition.pfs  [SUCCESS time: 3676 ms]
ps2pdf 992.ps 992.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 992.svg -n 992 -p partition/partition.pfs --svg  [SUCCESS time: 3697 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 993.ps -n 993 -p partition/partition.pfs  [SUCCESS time: 3693 ms]
ps2pdf 993.ps 993.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 993.svg -n 993 -p partition/partition.pfs --svg  [SUCCESS time: 3707 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 994.ps -n 994 -p partition/partition.pfs  [SUCCESS time: 3704 ms]
ps2pdf 994.ps 994.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 994.svg -n 994 -p partition/partition.pfs --svg  [SUCCESS time: 3675 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 995.ps -n 995 -p partition/partition.pfs  [SUCCESS time: 3694 ms]
ps2pdf 995.ps 995.pdf  [SUCCESS time: 272 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 995.svg -n 995 -p partition/partition.pfs --svg  [SUCCESS time: 3695 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 996.ps -n 996 -p partition/partition.pfs  [SUCCESS time: 3720 ms]
ps2pdf 996.ps 996.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 996.svg -n 996 -p partition/partition.pfs --svg  [SUCCESS time: 3732 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 997.ps -n 997 -p partition/partition.pfs  [SUCCESS time: 3689 ms]
ps2pdf 997.ps 997.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 997.svg -n 997 -p partition/partition.pfs --svg  [SUCCESS time: 3725 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 998.ps -n 998 -p partition/partition.pfs  [SUCCESS time: 3686 ms]
ps2pdf 998.ps 998.pdf  [SUCCESS time: 271 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 998.svg -n 998 -p partition/partition.pfs --svg  [SUCCESS time: 3709 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 999.ps -n 999 -p partition/partition.pfs  [SUCCESS time: 3689 ms]
ps2pdf 999.ps 999.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 999.svg -n 999 -p partition/partition.pfs --svg  [SUCCESS time: 3673 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1000.ps -n 1000 -p partition/partition.pfs  [SUCCESS time: 3686 ms]
ps2pdf 1000.ps 1000.pdf  [SUCCESS time: 270 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1000.svg -n 1000 -p partition/partition.pfs --svg  [SUCCESS time: 3694 ms]
/var/www/html/RNAstructureWeb/Executables/current/MaxExpect-smp partition/partition.pfs MaxExpect.ct --gamma 1 --percent 10 --structures 1000 --window 3  [SUCCESS time: 336426 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect.ct MaxExpect.ps -p partition/partition.pfs  [SUCCESS time: 1703 ms]
ps2pdf MaxExpect.ps MaxExpect.pdf  [SUCCESS time: 269 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect.ct MaxExpect.svg -n 1 -p partition/partition.pfs --svg  [SUCCESS time: 1696 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbKnot partition/partition.pfs ProbKnot.ct --iterations 1 --minimum 3  [SUCCESS time: 1686 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot.ct ProbKnot.ps -p partition/partition.pfs  [SUCCESS time: 1702 ms]
ps2pdf ProbKnot.ps ProbKnot.pdf  [SUCCESS time: 253 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot.ct ProbKnot.svg -n 1 -p partition/partition.pfs --svg  [SUCCESS time: 1688 ms]
JOB_END_TIME: 1766725475024
JOB_RUN_TIME: 12890681 ms
SERVER_NAME: Predict1
NODE: localhost
s-nail: Warning: variable superseded or obsoleted: smtp
s-nail: Warning -- v15-compat=yes will be default in v14.10.0!
s-nail: P(seudo)R(andom)N(umber)G(enerator): *TLS RAND_*
s-nail: Obsoletion warning: please do not use *smtp*, instead assign a smtp:// URL to *mta*!
s-nail: Obsoletion warning: Use of old-style credentials, which will vanish in v15!
s-nail:   Please read the manual section "On URL syntax and credential lookup"
s-nail: Resolving host smtp.urmc.rochester.edu:smtp ... done
s-nail: Connecting to 172.16.153.153:smtp ... connected.
mailx -s 'RNAstructure Web Servers Predict a Secondary Structure Calculation Complete' -b 'David_Mathews@urmc.rochester.edu' -S from=David_Mathews@urmc.rochester.edu -v 'David_Mathews@urmc.rochester.edu' < '/var/www/html/RNAstructureWeb/Servers/Predict1/ResultsPages/20251226.012943-4bb48aec/email.txt' (exit: 0)
JOB_COMPLETE