JOB_START_TIME: 1764387261910
/var/www/html/RNAstructureWeb/Executables/current/partition-smp Predict1.fasta partition.pfs --temperature 310.15 [SUCCESS time: 129236 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbabilityPlot partition.pfs partition.ps -max 2 [SUCCESS time: 424 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbabilityPlot partition.pfs partition.svg -max 2 --svg [SUCCESS time: 432 ms]
/var/www/html/RNAstructureWeb/Executables/current/Fold-smp Predict1.fasta Fold.ct --loop 30 --maximum 20 --percent 10 --temperature 310.15 --window 3 [SUCCESS time: 36961 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct Fold.ps -p partition/partition.pfs [SUCCESS time: 6714 ms]
ps2pdf Fold.ps Fold.pdf [SUCCESS time: 1724 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1.ps -n 1 -p partition/partition.pfs [SUCCESS time: 397 ms]
ps2pdf 1.ps 1.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1.svg -n 1 -p partition/partition.pfs --svg [SUCCESS time: 398 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 2.ps -n 2 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 2.ps 2.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 2.svg -n 2 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 3.ps -n 3 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 3.ps 3.pdf [SUCCESS time: 161 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 3.svg -n 3 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 4.ps -n 4 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 4.ps 4.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 4.svg -n 4 -p partition/partition.pfs --svg [SUCCESS time: 398 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 5.ps -n 5 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 5.ps 5.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 5.svg -n 5 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 6.ps -n 6 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 6.ps 6.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 6.svg -n 6 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 7.ps -n 7 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 7.ps 7.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 7.svg -n 7 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 8.ps -n 8 -p partition/partition.pfs [SUCCESS time: 397 ms]
ps2pdf 8.ps 8.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 8.svg -n 8 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 9.ps -n 9 -p partition/partition.pfs [SUCCESS time: 397 ms]
ps2pdf 9.ps 9.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 9.svg -n 9 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 10.ps -n 10 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 10.ps 10.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 10.svg -n 10 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 11.ps -n 11 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 11.ps 11.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 11.svg -n 11 -p partition/partition.pfs --svg [SUCCESS time: 396 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 12.ps -n 12 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 12.ps 12.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 12.svg -n 12 -p partition/partition.pfs --svg [SUCCESS time: 403 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 13.ps -n 13 -p partition/partition.pfs [SUCCESS time: 400 ms]
ps2pdf 13.ps 13.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 13.svg -n 13 -p partition/partition.pfs --svg [SUCCESS time: 401 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 14.ps -n 14 -p partition/partition.pfs [SUCCESS time: 400 ms]
ps2pdf 14.ps 14.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 14.svg -n 14 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 15.ps -n 15 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 15.ps 15.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 15.svg -n 15 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 16.ps -n 16 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 16.ps 16.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 16.svg -n 16 -p partition/partition.pfs --svg [SUCCESS time: 400 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 17.ps -n 17 -p partition/partition.pfs [SUCCESS time: 401 ms]
ps2pdf 17.ps 17.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 17.svg -n 17 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 18.ps -n 18 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 18.ps 18.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 18.svg -n 18 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 19.ps -n 19 -p partition/partition.pfs [SUCCESS time: 398 ms]
ps2pdf 19.ps 19.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 19.svg -n 19 -p partition/partition.pfs --svg [SUCCESS time: 402 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 20.ps -n 20 -p partition/partition.pfs [SUCCESS time: 401 ms]
ps2pdf 20.ps 20.pdf [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 20.svg -n 20 -p partition/partition.pfs --svg [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/MaxExpect-smp partition/partition.pfs MaxExpect.ct --gamma 1 --percent 10 --structures 20 --window 3 [SUCCESS time: 23110 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect.ct MaxExpect.ps -p partition/partition.pfs [SUCCESS time: 383 ms]
ps2pdf MaxExpect.ps MaxExpect.pdf [SUCCESS time: 163 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect.ct MaxExpect.svg -n 1 -p partition/partition.pfs --svg [SUCCESS time: 382 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbKnot partition/partition.pfs ProbKnot.ct --iterations 1 --minimum 3 [SUCCESS time: 364 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot.ct ProbKnot.ps -p partition/partition.pfs [SUCCESS time: 376 ms]
ps2pdf ProbKnot.ps ProbKnot.pdf [SUCCESS time: 155 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot.ct ProbKnot.svg -n 1 -p partition/partition.pfs --svg [SUCCESS time: 375 ms]
JOB_END_TIME: 1764387482194
JOB_RUN_TIME: 220284 ms
SERVER_NAME: Predict1
NODE: localhost
s-nail: Warning: variable superseded or obsoleted: smtp
s-nail: Warning -- v15-compat=yes will be default in v14.10.0!
s-nail: P(seudo)R(andom)N(umber)G(enerator): *TLS RAND_*
s-nail: Obsoletion warning: please do not use *smtp*, instead assign a smtp:// URL to *mta*!
s-nail: Obsoletion warning: Use of old-style credentials, which will vanish in v15!
s-nail: Please read the manual section "On URL syntax and credential lookup"
s-nail: Resolving host smtp.urmc.rochester.edu:smtp ... done
s-nail: Connecting to 172.16.137.161:smtp ... connected.
mailx -s 'RNAstructure Web Servers Predict a Secondary Structure Calculation Complete' -b 'David_Mathews@urmc.rochester.edu' -S from=David_Mathews@urmc.rochester.edu -v 'David_Mathews@urmc.rochester.edu' < '/var/www/html/RNAstructureWeb/Servers/Predict1/ResultsPages/20251129.033421-58d67c9f/email.txt' (exit: 0)
JOB_COMPLETE