JOB_START_TIME: 1763474366287
/var/www/html/RNAstructureWeb/Executables/current/partition Predict1.fasta partition.pfs --SHAPE manual_6616_6816.shape --SHAPEintercept -0.6 --SHAPEslope 1.8 --temperature 310.15  [SUCCESS time: 886 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbabilityPlot partition.pfs partition.ps -max 2  [SUCCESS time: 178 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbabilityPlot partition.pfs partition.svg -max 2 --svg  [SUCCESS time: 205 ms]
/var/www/html/RNAstructureWeb/Executables/current/Fold Predict1.fasta Fold.ct --loop 30 --maximum 20 --percent 10 --SHAPE manual_6616_6816.shape --SHAPEintercept -0.6 --SHAPEslope 1.8 --temperature 310.15 --window 3  [SUCCESS time: 2276 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct Fold.ps -p partition/partition.pfs  [SUCCESS time: 7378 ms]
ps2pdf Fold.ps Fold.pdf  [SUCCESS time: 647 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1.ps -n 1 -p partition/partition.pfs  [SUCCESS time: 427 ms]
ps2pdf 1.ps 1.pdf  [SUCCESS time: 184 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 1.svg -n 1 -p partition/partition.pfs --svg  [SUCCESS time: 428 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 2.ps -n 2 -p partition/partition.pfs  [SUCCESS time: 417 ms]
ps2pdf 2.ps 2.pdf  [SUCCESS time: 166 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 2.svg -n 2 -p partition/partition.pfs --svg  [SUCCESS time: 403 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 3.ps -n 3 -p partition/partition.pfs  [SUCCESS time: 418 ms]
ps2pdf 3.ps 3.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 3.svg -n 3 -p partition/partition.pfs --svg  [SUCCESS time: 400 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 4.ps -n 4 -p partition/partition.pfs  [SUCCESS time: 417 ms]
ps2pdf 4.ps 4.pdf  [SUCCESS time: 177 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 4.svg -n 4 -p partition/partition.pfs --svg  [SUCCESS time: 403 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 5.ps -n 5 -p partition/partition.pfs  [SUCCESS time: 418 ms]
ps2pdf 5.ps 5.pdf  [SUCCESS time: 171 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 5.svg -n 5 -p partition/partition.pfs --svg  [SUCCESS time: 401 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 6.ps -n 6 -p partition/partition.pfs  [SUCCESS time: 422 ms]
ps2pdf 6.ps 6.pdf  [SUCCESS time: 177 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 6.svg -n 6 -p partition/partition.pfs --svg  [SUCCESS time: 401 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 7.ps -n 7 -p partition/partition.pfs  [SUCCESS time: 418 ms]
ps2pdf 7.ps 7.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 7.svg -n 7 -p partition/partition.pfs --svg  [SUCCESS time: 401 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 8.ps -n 8 -p partition/partition.pfs  [SUCCESS time: 414 ms]
ps2pdf 8.ps 8.pdf  [SUCCESS time: 173 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 8.svg -n 8 -p partition/partition.pfs --svg  [SUCCESS time: 404 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 9.ps -n 9 -p partition/partition.pfs  [SUCCESS time: 423 ms]
ps2pdf 9.ps 9.pdf  [SUCCESS time: 174 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 9.svg -n 9 -p partition/partition.pfs --svg  [SUCCESS time: 403 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 10.ps -n 10 -p partition/partition.pfs  [SUCCESS time: 422 ms]
ps2pdf 10.ps 10.pdf  [SUCCESS time: 175 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 10.svg -n 10 -p partition/partition.pfs --svg  [SUCCESS time: 403 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 11.ps -n 11 -p partition/partition.pfs  [SUCCESS time: 417 ms]
ps2pdf 11.ps 11.pdf  [SUCCESS time: 173 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 11.svg -n 11 -p partition/partition.pfs --svg  [SUCCESS time: 402 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 12.ps -n 12 -p partition/partition.pfs  [SUCCESS time: 420 ms]
ps2pdf 12.ps 12.pdf  [SUCCESS time: 178 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 12.svg -n 12 -p partition/partition.pfs --svg  [SUCCESS time: 401 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 13.ps -n 13 -p partition/partition.pfs  [SUCCESS time: 420 ms]
ps2pdf 13.ps 13.pdf  [SUCCESS time: 174 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 13.svg -n 13 -p partition/partition.pfs --svg  [SUCCESS time: 400 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 14.ps -n 14 -p partition/partition.pfs  [SUCCESS time: 410 ms]
ps2pdf 14.ps 14.pdf  [SUCCESS time: 172 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 14.svg -n 14 -p partition/partition.pfs --svg  [SUCCESS time: 385 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 15.ps -n 15 -p partition/partition.pfs  [SUCCESS time: 411 ms]
ps2pdf 15.ps 15.pdf  [SUCCESS time: 173 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 15.svg -n 15 -p partition/partition.pfs --svg  [SUCCESS time: 399 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 16.ps -n 16 -p partition/partition.pfs  [SUCCESS time: 421 ms]
ps2pdf 16.ps 16.pdf  [SUCCESS time: 175 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 16.svg -n 16 -p partition/partition.pfs --svg  [SUCCESS time: 398 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 17.ps -n 17 -p partition/partition.pfs  [SUCCESS time: 421 ms]
ps2pdf 17.ps 17.pdf  [SUCCESS time: 174 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 17.svg -n 17 -p partition/partition.pfs --svg  [SUCCESS time: 404 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 18.ps -n 18 -p partition/partition.pfs  [SUCCESS time: 423 ms]
ps2pdf 18.ps 18.pdf  [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 18.svg -n 18 -p partition/partition.pfs --svg  [SUCCESS time: 395 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 19.ps -n 19 -p partition/partition.pfs  [SUCCESS time: 410 ms]
ps2pdf 19.ps 19.pdf  [SUCCESS time: 174 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 19.svg -n 19 -p partition/partition.pfs --svg  [SUCCESS time: 405 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 20.ps -n 20 -p partition/partition.pfs  [SUCCESS time: 416 ms]
ps2pdf 20.ps 20.pdf  [SUCCESS time: 178 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold.ct 20.svg -n 20 -p partition/partition.pfs --svg  [SUCCESS time: 400 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct Fold.ps -s manual_6616_6816.shape  [SUCCESS time: 6763 ms]
ps2pdf Fold.ps Fold.pdf  [SUCCESS time: 635 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 1.ps -n 1 -s manual_6616_6816.shape  [SUCCESS time: 376 ms]
ps2pdf 1.ps 1.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 1.svg -n 1 -s manual_6616_6816.shape --svg  [SUCCESS time: 364 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 2.ps -n 2 -s manual_6616_6816.shape  [SUCCESS time: 386 ms]
ps2pdf 2.ps 2.pdf  [SUCCESS time: 174 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 2.svg -n 2 -s manual_6616_6816.shape --svg  [SUCCESS time: 363 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 3.ps -n 3 -s manual_6616_6816.shape  [SUCCESS time: 383 ms]
ps2pdf 3.ps 3.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 3.svg -n 3 -s manual_6616_6816.shape --svg  [SUCCESS time: 369 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 4.ps -n 4 -s manual_6616_6816.shape  [SUCCESS time: 388 ms]
ps2pdf 4.ps 4.pdf  [SUCCESS time: 169 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 4.svg -n 4 -s manual_6616_6816.shape --svg  [SUCCESS time: 365 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 5.ps -n 5 -s manual_6616_6816.shape  [SUCCESS time: 382 ms]
ps2pdf 5.ps 5.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 5.svg -n 5 -s manual_6616_6816.shape --svg  [SUCCESS time: 361 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 6.ps -n 6 -s manual_6616_6816.shape  [SUCCESS time: 386 ms]
ps2pdf 6.ps 6.pdf  [SUCCESS time: 168 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 6.svg -n 6 -s manual_6616_6816.shape --svg  [SUCCESS time: 366 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 7.ps -n 7 -s manual_6616_6816.shape  [SUCCESS time: 376 ms]
ps2pdf 7.ps 7.pdf  [SUCCESS time: 166 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 7.svg -n 7 -s manual_6616_6816.shape --svg  [SUCCESS time: 368 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 8.ps -n 8 -s manual_6616_6816.shape  [SUCCESS time: 384 ms]
ps2pdf 8.ps 8.pdf  [SUCCESS time: 168 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 8.svg -n 8 -s manual_6616_6816.shape --svg  [SUCCESS time: 367 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 9.ps -n 9 -s manual_6616_6816.shape  [SUCCESS time: 383 ms]
ps2pdf 9.ps 9.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 9.svg -n 9 -s manual_6616_6816.shape --svg  [SUCCESS time: 365 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 10.ps -n 10 -s manual_6616_6816.shape  [SUCCESS time: 382 ms]
ps2pdf 10.ps 10.pdf  [SUCCESS time: 168 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 10.svg -n 10 -s manual_6616_6816.shape --svg  [SUCCESS time: 369 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 11.ps -n 11 -s manual_6616_6816.shape  [SUCCESS time: 382 ms]
ps2pdf 11.ps 11.pdf  [SUCCESS time: 168 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 11.svg -n 11 -s manual_6616_6816.shape --svg  [SUCCESS time: 368 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 12.ps -n 12 -s manual_6616_6816.shape  [SUCCESS time: 379 ms]
ps2pdf 12.ps 12.pdf  [SUCCESS time: 168 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 12.svg -n 12 -s manual_6616_6816.shape --svg  [SUCCESS time: 368 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 13.ps -n 13 -s manual_6616_6816.shape  [SUCCESS time: 408 ms]
ps2pdf 13.ps 13.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 13.svg -n 13 -s manual_6616_6816.shape --svg  [SUCCESS time: 365 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 14.ps -n 14 -s manual_6616_6816.shape  [SUCCESS time: 382 ms]
ps2pdf 14.ps 14.pdf  [SUCCESS time: 170 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 14.svg -n 14 -s manual_6616_6816.shape --svg  [SUCCESS time: 367 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 15.ps -n 15 -s manual_6616_6816.shape  [SUCCESS time: 387 ms]
ps2pdf 15.ps 15.pdf  [SUCCESS time: 178 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 15.svg -n 15 -s manual_6616_6816.shape --svg  [SUCCESS time: 365 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 16.ps -n 16 -s manual_6616_6816.shape  [SUCCESS time: 383 ms]
ps2pdf 16.ps 16.pdf  [SUCCESS time: 168 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 16.svg -n 16 -s manual_6616_6816.shape --svg  [SUCCESS time: 365 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 17.ps -n 17 -s manual_6616_6816.shape  [SUCCESS time: 382 ms]
ps2pdf 17.ps 17.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 17.svg -n 17 -s manual_6616_6816.shape --svg  [SUCCESS time: 380 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 18.ps -n 18 -s manual_6616_6816.shape  [SUCCESS time: 386 ms]
ps2pdf 18.ps 18.pdf  [SUCCESS time: 164 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 18.svg -n 18 -s manual_6616_6816.shape --svg  [SUCCESS time: 370 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 19.ps -n 19 -s manual_6616_6816.shape  [SUCCESS time: 385 ms]
ps2pdf 19.ps 19.pdf  [SUCCESS time: 171 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 19.svg -n 19 -s manual_6616_6816.shape --svg  [SUCCESS time: 571 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 20.ps -n 20 -s manual_6616_6816.shape  [SUCCESS time: 380 ms]
ps2pdf 20.ps 20.pdf  [SUCCESS time: 161 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw Fold/Fold.ct 20.svg -n 20 -s manual_6616_6816.shape --svg  [SUCCESS time: 364 ms]
/var/www/html/RNAstructureWeb/Executables/current/MaxExpect partition/partition.pfs MaxExpect.ct --gamma 1 --percent 10 --structures 20 --window 3  [SUCCESS time: 191 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect.ct MaxExpect.ps -p partition/partition.pfs  [SUCCESS time: 468 ms]
ps2pdf MaxExpect.ps MaxExpect.pdf  [SUCCESS time: 170 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect.ct MaxExpect.svg -n 1 -p partition/partition.pfs --svg  [SUCCESS time: 397 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect/MaxExpect.ct MaxExpect.ps -s manual_6616_6816.shape  [SUCCESS time: 415 ms]
ps2pdf MaxExpect.ps MaxExpect.pdf  [SUCCESS time: 174 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw MaxExpect/MaxExpect.ct MaxExpect.svg -n 1 -s manual_6616_6816.shape --svg  [SUCCESS time: 367 ms]
/var/www/html/RNAstructureWeb/Executables/current/ProbKnot partition/partition.pfs ProbKnot.ct --iterations 1 --minimum 3  [SUCCESS time: 188 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot.ct ProbKnot.ps -p partition/partition.pfs  [SUCCESS time: 440 ms]
ps2pdf ProbKnot.ps ProbKnot.pdf  [SUCCESS time: 167 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot.ct ProbKnot.svg -n 1 -p partition/partition.pfs --svg  [SUCCESS time: 396 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot/ProbKnot.ct ProbKnot.ps -s manual_6616_6816.shape  [SUCCESS time: 400 ms]
ps2pdf ProbKnot.ps ProbKnot.pdf  [SUCCESS time: 162 ms]
/var/www/html/RNAstructureWeb/Executables/current/draw ProbKnot/ProbKnot.ct ProbKnot.svg -n 1 -s manual_6616_6816.shape --svg  [SUCCESS time: 377 ms]
JOB_END_TIME: 1763474441128
JOB_RUN_TIME: 74841 ms
SERVER_NAME: Predict1
NODE: node01
Resolving host smtp.urmc.rochester.edu . . . done.
Connecting to 172.16.154.161:smtp . . .could not connect: No route to host
. . . message not sent.
mailx -s 'RNAstructure Web Servers Predict a Secondary Structure Calculation Complete' -b 'David_Mathews@urmc.rochester.edu,RNAWeb@urmc.rochester.edu' -S from=David_Mathews@urmc.rochester.edu -v 'David_Mathews@urmc.rochester.edu,RNAWeb@urmc.rochester.edu' < '/var/www/html/RNAstructureWeb/Servers/Predict1/ResultsPages/20251118.085949-66be5d1b/email.txt' (exit: 1)
JOB_COMPLETE