Turner 1999 Bulge Loop Example 1

example structure

∆G°₃₇ = ∆G°₃₇(Watson-Crick Pairs) + ∆G°_{37 intermolecular initiation} + ∆G°₃₇(Bulge Loop)

∆G°₃₇ = ∆G°₃₇(GC followed by CG) + ∆G°₃₇(CG followed by CG) + ∆G°_{37 intermolecular initiation} + ∆G°_{37 bulge initiation}(1) + ∆G°₃₇(CG followed by GC)

∆G°₃₇ = –3.42 kcal/mol – 3.26 kcal/mol + 4.09 kcal/mol + 3.8 kcal/mol – 2.36 kcal/mol

∆G°₃₇ = –1.2 kcal/mol

Turner 1999
Bulge Loop Example 1

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