Parameter |
ΔG°37 (kcal/mol) |
|
| Flush Coaxial Stack | Stack | Use helical stack parameter |
| Mismatch-Mediated Coaxial Stack | Mismatch stack, continuous backbone | Use terminal mismatch parameter |
| Mismatch stack, backbone not continuous | –2.1 |
|
| "Mismatch" is potentially a Watson-Crick pair | –0.4 | |
| "Mismatch is potentially a GU pair | –0.2 | |