#Data tables for asymmetric interior loops of size 3
#Free energies at 37 degrees for DNA
#Data Arrangement:
#For the 4x4 tables, each starting pair needs its own table.
#This is the AA table:
# 5' --> 3'
# X
# A A
# T T
# YA
# 3' <-- 5'
# Y->
# ----------------------------
# (X) A C G U
# | ----------------------------
# V
# (A) 1.8 2.0 1.9 2.5
# (C) 2.1 2.3 2.2 2.2
# (G) 1.9 2.3 1.9 2.5
# (U) 3.1 2.7 3.1 2.5
#An energy of "." is "infinity," i.e. not allowed.
# 5' --> 3'
X
A A
T T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.0 1.9 2.5
C 2.1 2.3 2.2 2.2
G 1.9 2.3 1.9 2.5
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A C
T G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.3 1.5 1.4 2.0
C 1.8 2.0 1.9 1.9
G 1.5 1.9 1.5 2.1
U 2.6 2.2 2.6 2.0
# 5' --> 3'
X
A G
T C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.6 1.5 2.1
C 1.9 2.1 2.0 2.0
G 1.6 2.0 1.6 2.2
U 2.7 2.3 2.7 2.1
# 5' --> 3'
X
A T
T A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.7 1.9 1.8 2.4
C 2.1 2.3 2.2 2.2
G 1.9 2.3 1.9 2.5
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A G
T T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.1 2.0 2.6
C 2.4 2.6 2.5 2.5
G 2.0 2.4 2.0 2.6
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A T
T G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.1 2.0 2.6
C 2.4 2.6 2.5 2.5
G 2.0 2.4 2.0 2.6
U 2.9 2.5 2.9 2.3
# 5' --> 3'
X
A A
T T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.1 2.0 2.6
C 2.3 2.5 2.4 2.4
G 2.0 2.4 2.0 2.6
U 2.7 2.3 2.7 2.1
# 5' --> 3'
X
A C
T G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.8 1.7 2.3
C 2.0 2.2 2.1 2.1
G 1.2 1.6 1.2 1.8
U 2.4 2.0 2.4 1.8
# 5' --> 3'
X
A G
T C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.7 1.9 1.8 2.4
C 2.1 2.3 2.2 2.2
G 1.7 2.1 1.7 2.3
U 2.4 2.0 2.4 1.8
# 5' --> 3'
X
A T
T A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.1 2.0 2.6
C 2.3 2.5 2.4 2.4
G 2.1 2.5 2.1 2.7
U 2.7 2.3 2.7 2.1
# 5' --> 3'
X
A G
T T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.2 2.4 2.3 2.9
C 2.4 2.6 2.5 2.5
G 2.2 2.6 2.2 2.8
U 2.9 2.5 2.9 2.3
# 5' --> 3'
X
A T
T G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.2 2.4 2.3 2.9
C 2.4 2.6 2.5 2.5
G 2.1 2.5 2.1 2.7
U 2.9 2.5 2.9 2.3
# 5' --> 3'
X
A A
T T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.0 1.9 2.5
C 2.6 2.8 2.7 2.7
G 1.9 2.3 1.9 2.5
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A C
T G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.6 1.5 2.1
C 1.8 2.0 1.9 1.9
G 1.5 1.9 1.5 2.1
U 2.8 2.4 2.8 2.2
# 5' --> 3'
X
A G
T C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.7 1.6 2.2
C 1.5 1.7 1.6 1.6
G 1.6 2.0 1.6 2.2
U 2.6 2.2 2.6 2.0
# 5' --> 3'
X
A T
T A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.0 1.9 2.5
C 2.4 2.6 2.5 2.5
G 1.9 2.3 1.9 2.5
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A G
T T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.1 2.0 2.6
C 2.1 2.3 2.2 2.2
G 2.0 2.4 2.0 2.6
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A T
T G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.1 2.0 2.6
C 2.2 2.4 2.3 2.3
G 2.0 2.4 2.0 2.6
U 3.1 2.7 3.1 2.5
# 5' --> 3'
X
A A
T T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.6 2.5 3.1
C 2.2 2.4 2.3 2.3
G 2.4 2.8 2.4 3.0
U 2.5 2.1 2.5 1.9
# 5' --> 3'
X
A C
T G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.2 2.1 2.7
C 1.9 2.1 2.0 2.0
G 2.1 2.5 2.1 2.7
U 2.2 1.8 2.2 1.6
# 5' --> 3'
X
A G
T C
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.2 2.4 2.3 2.9
C 1.9 2.1 2.0 2.0
G 2.1 2.5 2.1 2.7
U 2.2 1.8 2.2 1.6
# 5' --> 3'
X
A T
T A
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.6 2.5 3.1
C 2.2 2.4 2.3 2.3
G 2.5 2.9 2.5 3.1
U 2.5 2.1 2.5 1.9
# 5' --> 3'
X
A G
T T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.6 2.5 3.1
C 2.4 2.6 2.5 2.5
G 2.5 2.9 2.5 3.1
U 2.9 2.5 2.9 2.3
# 5' --> 3'
X
A T
T G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.6 2.5 3.1
C 2.4 2.6 2.5 2.5
G 2.5 2.9 2.5 3.1
U 2.9 2.5 2.9 2.3
# 5' --> 3'
X
C A
G T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 1.9 2.1 1.8 1.9
G 1.6 1.4 1.6 2.0
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C C
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.0 1.3 1.1 1.6
C 1.6 1.8 1.5 1.6
G 1.2 1.0 1.2 1.6
U 2.4 1.9 2.2 1.7
# 5' --> 3'
X
C G
G C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.1 1.4 1.2 1.7
C 1.7 1.9 1.6 1.7
G 1.3 1.1 1.3 1.7
U 2.5 2.0 2.3 1.8
# 5' --> 3'
X
C T
G A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.7 1.5 2.0
C 1.9 2.1 1.8 1.9
G 1.6 1.4 1.6 2.0
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C G
G T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 2.2 2.4 2.1 2.2
G 1.7 1.5 1.7 2.1
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C T
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 2.2 2.4 2.1 2.2
G 1.7 1.5 1.7 2.1
U 2.7 2.2 2.5 2.0
# 5' --> 3'
X
C A
G T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 2.1 2.3 2.0 2.1
G 1.7 1.5 1.7 2.1
U 2.5 2.0 2.3 1.8
# 5' --> 3'
X
C C
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.3 1.6 1.4 1.9
C 1.8 2.0 1.7 1.8
G 0.9 0.7 0.9 1.3
U 2.2 1.7 2.0 1.5
# 5' --> 3'
X
C G
G C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.7 1.5 2.0
C 1.9 2.1 1.8 1.9
G 1.4 1.2 1.4 1.8
U 2.2 1.7 2.0 1.5
# 5' --> 3'
X
C T
G A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 2.1 2.3 2.0 2.1
G 1.8 1.6 1.8 2.2
U 2.5 2.0 2.3 1.8
# 5' --> 3'
X
C G
G T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 2.0 2.5
C 2.2 2.4 2.1 2.2
G 1.9 1.7 1.9 2.3
U 2.7 2.2 2.5 2.0
# 5' --> 3'
X
C T
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 2.0 2.5
C 2.2 2.4 2.1 2.2
G 1.8 1.6 1.8 2.2
U 2.7 2.2 2.5 2.0
# 5' --> 3'
X
C A
G T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 2.4 2.6 2.3 2.4
G 1.6 1.4 1.6 2.0
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C C
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.1 1.4 1.2 1.7
C 1.6 1.8 1.5 1.6
G 1.2 1.0 1.2 1.6
U 2.6 2.1 2.4 1.9
# 5' --> 3'
X
C G
G C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.2 1.5 1.3 1.8
C 1.3 1.5 1.2 1.3
G 1.3 1.1 1.3 1.7
U 2.4 1.9 2.2 1.7
# 5' --> 3'
X
C T
G A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 2.2 2.4 2.1 2.2
G 1.6 1.4 1.6 2.0
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C G
G T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 1.9 2.1 1.8 1.9
G 1.7 1.5 1.7 2.1
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C T
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 2.0 2.2 1.9 2.0
G 1.7 1.5 1.7 2.1
U 2.9 2.4 2.7 2.2
# 5' --> 3'
X
C A
G T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.2 2.7
C 2.0 2.2 1.9 2.0
G 2.1 1.9 2.1 2.5
U 2.3 1.8 2.1 1.6
# 5' --> 3'
X
C C
G G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.7 2.0 1.8 2.3
C 1.7 1.9 1.6 1.7
G 1.8 1.6 1.8 2.2
U 2.0 1.5 1.8 1.3
# 5' --> 3'
X
C G
G C
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 2.0 2.5
C 1.7 1.9 1.6 1.7
G 1.8 1.6 1.8 2.2
U 2.0 1.5 1.8 1.3
# 5' --> 3'
X
C T
G A
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.2 2.7
C 2.0 2.2 1.9 2.0
G 2.2 2.0 2.2 2.6
U 2.3 1.8 2.1 1.6
# 5' --> 3'
X
C G
G T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.2 2.7
C 2.2 2.4 2.1 2.2
G 2.2 2.0 2.2 2.6
U 2.7 2.2 2.5 2.0
# 5' --> 3'
X
C T
G G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.2 2.7
C 2.2 2.4 2.1 2.2
G 2.2 2.0 2.2 2.6
U 2.7 2.2 2.5 2.0
# 5' --> 3'
X
G A
C T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.7 1.5 2.0
C 1.8 2.0 1.3 1.9
G 1.5 1.7 1.5 2.2
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G C
C G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 0.9 1.2 1.0 1.5
C 1.5 1.7 1.0 1.6
G 1.1 1.3 1.1 1.8
U 2.2 1.9 2.2 1.7
# 5' --> 3'
X
G G
C C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.0 1.3 1.1 1.6
C 1.6 1.8 1.1 1.7
G 1.2 1.4 1.2 1.9
U 2.3 2.0 2.3 1.8
# 5' --> 3'
X
G T
C A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.3 1.6 1.4 1.9
C 1.8 2.0 1.3 1.9
G 1.5 1.7 1.5 2.2
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G G
C T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 2.1 2.3 1.6 2.2
G 1.6 1.8 1.6 2.3
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G T
C G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 2.1 2.3 1.6 2.2
G 1.6 1.8 1.6 2.3
U 2.5 2.2 2.5 2.0
# 5' --> 3'
X
G A
C T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 2.0 2.2 1.5 2.1
G 1.6 1.8 1.6 2.3
U 2.3 2.0 2.3 1.8
# 5' --> 3'
X
G C
C G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.2 1.5 1.3 1.8
C 1.7 1.9 1.2 1.8
G 0.8 1.0 0.8 1.5
U 2.0 1.7 2.0 1.5
# 5' --> 3'
X
G G
C C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.3 1.6 1.4 1.9
C 1.8 2.0 1.3 1.9
G 1.3 1.5 1.3 2.0
U 2.0 1.7 2.0 1.5
# 5' --> 3'
X
G T
C A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 2.0 2.2 1.5 2.1
G 1.7 1.9 1.7 2.4
U 2.3 2.0 2.3 1.8
# 5' --> 3'
X
G G
C T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.1 1.9 2.4
C 2.1 2.3 1.6 2.2
G 1.8 2.0 1.8 2.5
U 2.5 2.2 2.5 2.0
# 5' --> 3'
X
G T
C G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.1 1.9 2.4
C 2.1 2.3 1.6 2.2
G 1.7 1.9 1.7 2.4
U 2.5 2.2 2.5 2.0
# 5' --> 3'
X
G A
C T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.7 1.5 2.0
C 2.3 2.5 1.8 2.4
G 1.5 1.7 1.5 2.2
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G C
C G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.0 1.3 1.1 1.6
C 1.5 1.7 1.0 1.6
G 1.1 1.3 1.1 1.8
U 2.4 2.1 2.4 1.9
# 5' --> 3'
X
G G
C C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.1 1.4 1.2 1.7
C 1.2 1.4 0.7 1.3
G 1.2 1.4 1.2 1.9
U 2.2 1.9 2.2 1.7
# 5' --> 3'
X
G T
C A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.7 1.5 2.0
C 2.1 2.3 1.6 2.2
G 1.5 1.7 1.5 2.2
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G G
C T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 1.8 2.0 1.3 1.9
G 1.6 1.8 1.6 2.3
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G T
C G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.6 2.1
C 1.9 2.1 1.4 2.0
G 1.6 1.8 1.6 2.3
U 2.7 2.4 2.7 2.2
# 5' --> 3'
X
G A
C T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.1 2.6
C 1.9 2.1 1.4 2.0
G 2.0 2.2 2.0 2.7
U 2.1 1.8 2.1 1.6
# 5' --> 3'
X
G C
C G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.7 2.2
C 1.6 1.8 1.1 1.7
G 1.7 1.9 1.7 2.4
U 1.8 1.5 1.8 1.3
# 5' --> 3'
X
G G
C C
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.1 1.9 2.4
C 1.6 1.8 1.1 1.7
G 1.7 1.9 1.7 2.4
U 1.8 1.5 1.8 1.3
# 5' --> 3'
X
G T
C A
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.1 2.6
C 1.9 2.1 1.4 2.0
G 2.1 2.3 2.1 2.8
U 2.1 1.8 2.1 1.6
# 5' --> 3'
X
G G
C T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.1 2.6
C 2.1 2.3 1.6 2.2
G 2.1 2.3 2.1 2.8
U 2.5 2.2 2.5 2.0
# 5' --> 3'
X
G T
C G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.1 2.6
C 2.1 2.3 1.6 2.2
G 2.1 2.3 2.1 2.8
U 2.5 2.2 2.5 2.0
# 5' --> 3'
X
T A
A T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.0 1.9 2.5
C 2.1 2.3 2.1 2.2
G 1.9 2.5 1.9 2.5
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T C
A G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.4 1.5 1.4 2.0
C 1.8 2.0 1.8 1.9
G 1.5 2.1 1.5 2.1
U 2.6 2.2 2.5 2.0
# 5' --> 3'
X
T G
A C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.6 1.5 2.1
C 1.9 2.1 1.9 2.0
G 1.6 2.2 1.6 2.2
U 2.7 2.3 2.6 2.1
# 5' --> 3'
X
T T
A A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 1.9 1.8 2.4
C 2.1 2.3 2.1 2.2
G 1.9 2.5 1.9 2.5
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T G
A T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.1 2.0 2.6
C 2.4 2.6 2.4 2.5
G 2.0 2.6 2.0 2.6
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T T
A G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.1 2.0 2.6
C 2.4 2.6 2.4 2.5
G 2.0 2.6 2.0 2.6
U 2.9 2.5 2.8 2.3
# 5' --> 3'
X
T A
A T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.1 2.0 2.6
C 2.3 2.5 2.3 2.4
G 2.0 2.6 2.0 2.6
U 2.7 2.3 2.6 2.1
# 5' --> 3'
X
T C
A G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.7 1.8 1.7 2.3
C 2.0 2.2 2.0 2.1
G 1.2 1.8 1.2 1.8
U 2.4 2.0 2.3 1.8
# 5' --> 3'
X
T G
A C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 1.9 1.8 2.4
C 2.1 2.3 2.1 2.2
G 1.7 2.3 1.7 2.3
U 2.4 2.0 2.3 1.8
# 5' --> 3'
X
T T
A A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.1 2.0 2.6
C 2.3 2.5 2.3 2.4
G 2.1 2.7 2.1 2.7
U 2.7 2.3 2.6 2.1
# 5' --> 3'
X
T G
A T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.4 2.3 2.9
C 2.4 2.6 2.4 2.5
G 2.2 2.8 2.2 2.8
U 2.9 2.5 2.8 2.3
# 5' --> 3'
X
T T
A G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.4 2.3 2.9
C 2.4 2.6 2.4 2.5
G 2.1 2.7 2.1 2.7
U 2.9 2.5 2.8 2.3
# 5' --> 3'
X
T A
A T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.0 1.9 2.5
C 2.6 2.8 2.6 2.7
G 1.9 2.5 1.9 2.5
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T C
A G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.6 1.5 2.1
C 1.8 2.0 1.8 1.9
G 1.5 2.1 1.5 2.1
U 2.8 2.4 2.7 2.2
# 5' --> 3'
X
T G
A C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.7 1.6 2.2
C 1.5 1.7 1.5 1.6
G 1.6 2.2 1.6 2.2
U 2.6 2.2 2.5 2.0
# 5' --> 3'
X
T T
A A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.0 1.9 2.5
C 2.4 2.6 2.4 2.5
G 1.9 2.5 1.9 2.5
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T G
A T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.1 2.0 2.6
C 2.1 2.3 2.1 2.2
G 2.0 2.6 2.0 2.6
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T T
A G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.1 2.0 2.6
C 2.2 2.4 2.2 2.3
G 2.0 2.6 2.0 2.6
U 3.1 2.7 3.0 2.5
# 5' --> 3'
X
T A
A T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 2.6 2.5 3.1
C 2.2 2.4 2.2 2.3
G 2.4 3.0 2.4 3.0
U 2.5 2.1 2.4 1.9
# 5' --> 3'
X
T C
A G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.2 2.1 2.7
C 1.9 2.1 1.9 2.0
G 2.1 2.7 2.1 2.7
U 2.2 1.8 2.1 1.6
# 5' --> 3'
X
T G
A C
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.3 2.4 2.3 2.9
C 1.9 2.1 1.9 2.0
G 2.1 2.7 2.1 2.7
U 2.2 1.8 2.1 1.6
# 5' --> 3'
X
T T
A A
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 2.6 2.5 3.1
C 2.2 2.4 2.2 2.3
G 2.5 3.1 2.5 3.1
U 2.5 2.1 2.4 1.9
# 5' --> 3'
X
T G
A T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 2.6 2.5 3.1
C 2.4 2.6 2.4 2.5
G 2.5 3.1 2.5 3.1
U 2.9 2.5 2.8 2.3
# 5' --> 3'
X
T T
A G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.5 2.6 2.5 3.1
C 2.4 2.6 2.4 2.5
G 2.5 3.1 2.5 3.1
U 2.9 2.5 2.8 2.3
# 5' --> 3'
X
G A
T T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.0 2.3
C 2.4 2.4 2.2 2.4
G 2.0 2.1 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G C
T G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.5 1.8
C 2.1 2.1 1.9 2.1
G 1.6 1.7 1.6 2.1
U 2.6 2.4 2.6 2.4
# 5' --> 3'
X
G G
T C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.6 1.9
C 2.2 2.2 2.0 2.2
G 1.7 1.8 1.7 2.2
U 2.7 2.5 2.7 2.5
# 5' --> 3'
X
G T
T A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 1.9 2.2
C 2.4 2.4 2.2 2.4
G 2.0 2.1 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G G
T T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.4
C 2.7 2.7 2.5 2.7
G 2.1 2.2 2.1 2.6
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G T
T G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.4
C 2.7 2.7 2.5 2.7
G 2.1 2.2 2.1 2.6
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
G A
T T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.4
C 2.6 2.6 2.4 2.6
G 2.1 2.2 2.1 2.6
U 2.7 2.5 2.7 2.5
# 5' --> 3'
X
G C
T G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.1 1.8 2.1
C 2.3 2.3 2.1 2.3
G 1.3 1.4 1.3 1.8
U 2.4 2.2 2.4 2.2
# 5' --> 3'
X
G G
T C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 1.9 2.2
C 2.4 2.4 2.2 2.4
G 1.8 1.9 1.8 2.3
U 2.4 2.2 2.4 2.2
# 5' --> 3'
X
G T
T A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.4
C 2.6 2.6 2.4 2.6
G 2.2 2.3 2.2 2.7
U 2.7 2.5 2.7 2.5
# 5' --> 3'
X
G G
T T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.7 2.4 2.7
C 2.7 2.7 2.5 2.7
G 2.3 2.4 2.3 2.8
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
G T
T G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.7 2.4 2.7
C 2.7 2.7 2.5 2.7
G 2.2 2.3 2.2 2.7
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
G A
T T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.0 2.3
C 2.9 2.9 2.7 2.9
G 2.0 2.1 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G C
T G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.6 1.9
C 2.1 2.1 1.9 2.1
G 1.6 1.7 1.6 2.1
U 2.8 2.6 2.8 2.6
# 5' --> 3'
X
G G
T C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.7 2.0 1.7 2.0
C 1.8 1.8 1.6 1.8
G 1.7 1.8 1.7 2.2
U 2.6 2.4 2.6 2.4
# 5' --> 3'
X
G T
T A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.0 2.3
C 2.7 2.7 2.5 2.7
G 2.0 2.1 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G G
T T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.4
C 2.4 2.4 2.2 2.4
G 2.1 2.2 2.1 2.6
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G T
T G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.4
C 2.5 2.5 2.3 2.5
G 2.1 2.2 2.1 2.6
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
G A
T T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 2.9
C 2.5 2.5 2.3 2.5
G 2.5 2.6 2.5 3.0
U 2.5 2.3 2.5 2.3
# 5' --> 3'
X
G C
T G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.2 2.5 2.2 2.5
C 2.2 2.2 2.0 2.2
G 2.2 2.3 2.2 2.7
U 2.2 2.0 2.2 2.0
# 5' --> 3'
X
G G
T C
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.7 2.4 2.7
C 2.2 2.2 2.0 2.2
G 2.2 2.3 2.2 2.7
U 2.2 2.0 2.2 2.0
# 5' --> 3'
X
G T
T A
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 2.9
C 2.5 2.5 2.3 2.5
G 2.6 2.7 2.6 3.1
U 2.5 2.3 2.5 2.3
# 5' --> 3'
X
G G
T T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 2.9
C 2.7 2.7 2.5 2.7
G 2.6 2.7 2.6 3.1
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
G T
T G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 2.9
C 2.7 2.7 2.5 2.7
G 2.6 2.7 2.6 3.1
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
T A
G T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.0 2.5
C 2.4 2.4 2.3 2.4
G 2.0 2.0 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T C
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.5 1.8 1.5 2.0
C 2.1 2.1 2.0 2.1
G 1.6 1.6 1.6 2.1
U 2.6 2.4 2.6 2.4
# 5' --> 3'
X
T G
G C
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.6 2.1
C 2.2 2.2 2.1 2.2
G 1.7 1.7 1.7 2.2
U 2.7 2.5 2.7 2.5
# 5' --> 3'
X
T T
G A
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 1.9 2.4
C 2.4 2.4 2.3 2.4
G 2.0 2.0 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T G
G T
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.6
C 2.7 2.7 2.6 2.7
G 2.1 2.1 2.1 2.6
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T T
G G
YA
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.6
C 2.7 2.7 2.6 2.7
G 2.1 2.1 2.1 2.6
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
T A
G T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.6
C 2.6 2.6 2.5 2.6
G 2.1 2.1 2.1 2.6
U 2.7 2.5 2.7 2.5
# 5' --> 3'
X
T C
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.8 2.1 1.8 2.3
C 2.3 2.3 2.2 2.3
G 1.3 1.3 1.3 1.8
U 2.4 2.2 2.4 2.2
# 5' --> 3'
X
T G
G C
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.9 2.2 1.9 2.4
C 2.4 2.4 2.3 2.4
G 1.8 1.8 1.8 2.3
U 2.4 2.2 2.4 2.2
# 5' --> 3'
X
T T
G A
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.6
C 2.6 2.6 2.5 2.6
G 2.2 2.2 2.2 2.7
U 2.7 2.5 2.7 2.5
# 5' --> 3'
X
T G
G T
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.7 2.4 2.9
C 2.7 2.7 2.6 2.7
G 2.3 2.3 2.3 2.8
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
T T
G G
YC
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.7 2.4 2.9
C 2.7 2.7 2.6 2.7
G 2.2 2.2 2.2 2.7
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
T A
G T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.0 2.5
C 2.9 2.9 2.8 2.9
G 2.0 2.0 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T C
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.6 1.9 1.6 2.1
C 2.1 2.1 2.0 2.1
G 1.6 1.6 1.6 2.1
U 2.8 2.6 2.8 2.6
# 5' --> 3'
X
T G
G C
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 1.7 2.0 1.7 2.2
C 1.8 1.8 1.7 1.8
G 1.7 1.7 1.7 2.2
U 2.6 2.4 2.6 2.4
# 5' --> 3'
X
T T
G A
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.0 2.3 2.0 2.5
C 2.7 2.7 2.6 2.7
G 2.0 2.0 2.0 2.5
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T G
G T
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.6
C 2.4 2.4 2.3 2.4
G 2.1 2.1 2.1 2.6
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T T
G G
YG
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.1 2.4 2.1 2.6
C 2.5 2.5 2.4 2.5
G 2.1 2.1 2.1 2.6
U 3.1 2.9 3.1 2.9
# 5' --> 3'
X
T A
G T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 3.1
C 2.5 2.5 2.4 2.5
G 2.5 2.5 2.5 3.0
U 2.5 2.3 2.5 2.3
# 5' --> 3'
X
T C
G G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.2 2.5 2.2 2.7
C 2.2 2.2 2.1 2.2
G 2.2 2.2 2.2 2.7
U 2.2 2.0 2.2 2.0
# 5' --> 3'
X
T G
G C
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.4 2.7 2.4 2.9
C 2.2 2.2 2.1 2.2
G 2.2 2.2 2.2 2.7
U 2.2 2.0 2.2 2.0
# 5' --> 3'
X
T T
G A
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 3.1
C 2.5 2.5 2.4 2.5
G 2.6 2.6 2.6 3.1
U 2.5 2.3 2.5 2.3
# 5' --> 3'
X
T G
G T
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 3.1
C 2.7 2.7 2.6 2.7
G 2.6 2.6 2.6 3.1
U 2.9 2.7 2.9 2.7
# 5' --> 3'
X
T T
G G
YT
# 3' <-- 5'
# Y
# ----------------------------
A C G U
# ----------------------------
A 2.6 2.9 2.6 3.1
C 2.7 2.7 2.6 2.7
G 2.6 2.6 2.6 3.1
U 2.9 2.7 2.9 2.7